Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  169 bits (429), Expect = 6e-47
 Identities = 104/302 (34%), Positives = 161/302 (53%), Gaps = 14/302 (4%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           MD F  M ++  +V+   L AA +  S+S   V   L+ALE+R GV LL R+TR   LTE
Sbjct: 1   MDLFQAMRVYVKVVEAGSLTAAAQACSISTTMVGNHLRALEERLGVSLLQRTTRRQRLTE 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
            G  Y++ CLE+L  V E+E L +    +  GTL+++AP   G + +AP L  F+ ++PE
Sbjct: 61  FGTAYYERCLEVLGLVAESEQLAEQAHGDPTGTLRITAPLTFGSEVLAPALVEFSRRFPE 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSS-LISRKLATSRRVLCASPAYLARKGIPK 179
           V   L L +   ++ ++G DV IR G + +SS LI+R L      +CA+P YLAR G P 
Sbjct: 121 VRLDLVLTNQRLDMIDNGFDVAIRLGNIPESSPLIARPLQDYTLTICAAPDYLARHGTPT 180

Query: 180 TPQDLAQHDCLAMV-RSNEEMKT----WHFQENEQHKVITVVPKSFADDGEVIRQWALAG 234
            P+DL +H+CLA    + +E +T    W     +   ++ V     A+    + Q A AG
Sbjct: 181 HPEDLREHNCLAFAYPAGDEWRTAGTQWRMTGADGDVLVEVSGSMVANTSAGLYQAARAG 240

Query: 235 MGIALKSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFI 294
           MG+ +     VQ DL + RL  +   Y              +N+LY+  +Y+  +LR F+
Sbjct: 241 MGVVMLPDALVQRDLQEGRLFALFPDY--------HLPRRPMNLLYVQDRYRLPKLRSFV 292

Query: 295 DF 296
           ++
Sbjct: 293 EY 294