Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  179 bits (454), Expect = 7e-50
 Identities = 108/302 (35%), Positives = 161/302 (53%), Gaps = 9/302 (2%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           M +F D+ LF        L+AA R + +S A  +A L+ +E + G +LL RSTR L LT 
Sbjct: 1   MLRFDDLQLFVRAADLGSLSAAARVMDMSAAVASAALKRIERQLGTRLLARSTRSLRLTA 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
            G  + +     L S+ E   LL +      G L++SAP D+G+  + P L  F +Q+P+
Sbjct: 61  EGEGFLEYARAALGSLEEGRRLLASSQDRCEGVLQLSAPSDLGRNVLLPWLDEFQQQHPQ 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRK-LATSRRVLCASPAYLARKGIPK 179
           +   L L D I++L    +DV +RYGE  DSSL++   L  +RRVLCA+P+YL R G P 
Sbjct: 121 LTVRLLLGDRIADLFRQPVDVALRYGEPEDSSLVALPVLPDNRRVLCAAPSYLQRHGEPH 180

Query: 180 TPQDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIAL 239
             + LAQH+CL  +  +     W   + ++   +TV    F+DD +V+R+WA+AG G+A 
Sbjct: 181 QVEQLAQHNCLLFMLGDRVHDRWTLNDGKREISLTVSGNRFSDDADVVRRWAVAGEGVAY 240

Query: 240 KSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIE 299
           KS LDV  D        V  G++K          A LN+L   R    K + L ++ L  
Sbjct: 241 KSWLDVAAD--------VRAGHLKVLMPDLVGERAPLNLLCAHRAQLSKPVILLLEMLRS 292

Query: 300 QC 301
           +C
Sbjct: 293 RC 294