Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  186 bits (473), Expect = 5e-52
 Identities = 107/299 (35%), Positives = 169/299 (56%), Gaps = 5/299 (1%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           MD  + M L + +V+    + AGR L ++P++V+ ++ ALED  G +LLNR+TR LSLTE
Sbjct: 1   MDILSGMRLLSRVVEAGSFSEAGRLLGMAPSSVSRQVSALEDTLGTQLLNRTTRRLSLTE 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
           +G L+H   L IL  V +   ++ +     RGTLK++ P   G  H+AP L  F  +YP+
Sbjct: 61  AGGLFHDRALRILADVEDATRVVSSLESAPRGTLKLNVPVGFGNYHVAPALPLFLARYPD 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKT 180
           +   L L+D+  +L E G+DV +R G L DSSL++R+LA +RR++  SP YL R G P+T
Sbjct: 121 LTVDLTLSDHFIDLIEEGVDVAVRIGALRDSSLVARRLADNRRMVYGSPDYLRRMGTPET 180

Query: 181 PQDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIALK 240
           P DL  H C+A  R     + W F+ +     ITV     A++ E + +  L G G+A+ 
Sbjct: 181 PHDLTAHRCIA-YRYRPGPQGWLFERDGIRLDITVTGPLTANNSESLHKMILGGSGLAML 239

Query: 241 SILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIE 299
                  D+    LV +L  +  +  +  SA    ++V+Y   ++   ++R FIDF+ +
Sbjct: 240 PTWMAYSDVKSGLLVPLLGDWTMSPTSLESA----IHVVYPESRHLSAKVRAFIDFMAD 294