Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., transcriptional regulator, LysR family from Paraburkholderia bryophila 376MFSha3.1

 Score =  168 bits (426), Expect = 2e-46
 Identities = 102/303 (33%), Positives = 167/303 (55%), Gaps = 16/303 (5%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           MD    M +F  +      A A   + +S A  T  +  LE R G +LLNR+TR LSLTE
Sbjct: 1   MDHLQSMRVFVKVADLGSFARAASAMDISNAVATRHVADLEGRLGTRLLNRTTRSLSLTE 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
           SG +Y +   +IL+ + + E ++   + E  GTL++ AP   G  ++AP+L  + E+YP+
Sbjct: 61  SGQVYLERARQILDELEDVEQMVVARNHEPVGTLRIVAPVVFGLHNLAPVLQTYAERYPK 120

Query: 121 VVPYLYLNDNISNLAESGLDV-VIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPK 179
           V+P + L D   +L E G DV V+   ++  +S+++R+L T    +CA+PAYL + G P 
Sbjct: 121 VIPDVTLVDRQVDLVEEGFDVGVVIARQMRSASIVTRRLTTGCMTVCATPAYLEKHGTPT 180

Query: 180 TPQDLAQHDCLAMVRSN-EEMKTWHFQENEQHKVITVVPKS--FADDGEVIRQWALAGMG 236
            P+ L +H CL++      + + +   E E    + V P +   A++ E++RQ+AL GMG
Sbjct: 181 RPEHLLEHPCLSLPSEYWGDERVFTGPEGE----VRVRPSNVIVANNTEMLRQFALLGMG 236

Query: 237 IALKSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDF 296
           IA+     +  D+ + RLV +L  Y             ++N+ Y SR++ P ++R FID 
Sbjct: 237 IAILPSYLIGRDMTRGRLVRLLGDY--------RLPQVEINIAYPSRRHLPAKVRTFIDH 288

Query: 297 LIE 299
           L+E
Sbjct: 289 LVE 291