Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  183 bits (465), Expect = 4e-51
 Identities = 106/292 (36%), Positives = 159/292 (54%), Gaps = 8/292 (2%)

Query: 6   DMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTESGVLY 65
           D+ L   I   + L+AA +E+ ++PA  +A LQ LE + G +L  RSTR L LTE G ++
Sbjct: 6   DLQLALRIAALESLSAASKEVGMTPAAASAALQRLEKKLGCQLFARSTRRLQLTEEGRIF 65

Query: 66  HQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPEVVPYL 125
                  L  +      L     E++G ++++ P DIG+  I   L    +  P++   L
Sbjct: 66  LDTAKPALALLETASANLAEHRGELKGEVRIALPSDIGRSRIRNWLDELMDSAPDLSIQL 125

Query: 126 YLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKTPQDLA 185
           Y  D++++L +  + + +RYG+L DS+L  R+L+ + RVL ASPAYLA+ G P+T  +L+
Sbjct: 126 YFGDHMADLIDQNIHLALRYGQLEDSNLKRRQLSMTPRVLVASPAYLAQHGEPQTLNELS 185

Query: 186 QHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIALKSILDV 245
           QH  L + R  E  + W F  N +   I V  K F +DG V+R WALAG GIA KS LDV
Sbjct: 186 QHQVLILNRGGEPWQKWKFSHNGEAVEIEVRGKRFCNDGAVVRDWALAGRGIAYKSWLDV 245

Query: 246 QDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFL 297
             D+ + RL  +L        A   A    L ++YL   Y   ++R  I+FL
Sbjct: 246 AQDVTEGRLKLIL--------ADKLAPAVPLQLVYLQTDYPSHKIRRTIEFL 289