Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., ATP-dependent RNA helicase RhlE from Xanthomonas campestris pv. campestris strain 8004

 Score =  262 bits (670), Expect = 1e-74
 Identities = 166/410 (40%), Positives = 230/410 (56%), Gaps = 18/410 (4%)

Query: 27  SLALSADLIQALPKA-ITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLERLK 85
           SL L      AL +A +   + IQ  +IP ML  +D+ A A TGSGKTLAY LPLL++  
Sbjct: 9   SLQLQPVFESALARAGVRALTPIQVAMIPPMLAARDLIATAQTGSGKTLAYALPLLQQRL 68

Query: 86  TSPEQQ-----ALVLVPTRELAMQVSEVLTHVGTALG--LNTLCLCGGVDKTEQQNALAE 138
            +PEQ       L+LVPTREL  QV+  L  +  AL   L  +   GG     Q  AL  
Sbjct: 69  QAPEQAPRVLGGLILVPTRELVAQVAHTLLSLAAALPRRLKIVAATGGEAINPQLMALRG 128

Query: 139 NPNILVATTGRLFDL-TQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQTV 197
             +I++AT GRL DL T + LRL++V+TLVLDEADRLLD+GF  ++  + +     RQ+V
Sbjct: 129 GADIVIATPGRLLDLVTHNALRLSQVSTLVLDEADRLLDLGFGAELDRILALLPAQRQSV 188

Query: 198 MCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLKQHQ 257
           + SATF   +   A++ +R P +++         A+ +    V+ G +TQ L  LL +H 
Sbjct: 189 LVSATFPAAIASLAKRRLRDPLRITLGGTPEQAPAIAQRAIAVDAGQRTQLLRHLLLEHG 248

Query: 258 WPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATDL 317
           WPQ+LVF+ ++  AD + +KL+K GI A  LHG+ SQ  RE  L  FK    QVL+ATDL
Sbjct: 249 WPQLLVFVTSRHGADKVAEKLSKTGIAALPLHGELSQGRRERTLRAFKQADVQVLVATDL 308

Query: 318 LARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATRTLT 377
             RGI I+ LP V+N++LP     Y HR+GRTARAG  G+A+S V     D+    R + 
Sbjct: 309 AGRGIDIDALPAVLNYDLPRSTVDYTHRIGRTARAGASGVAISFV---TADSAQQWRLIE 365

Query: 378 QRE---LPVQNLEGF---PVTDQPSTGESKRAPRDKQANRRTQNKKSVKQ 421
           +R+   +P   +EGF   PV        S  A R    N   + K+  K+
Sbjct: 366 KRQGLRVPTSVIEGFEPTPVQAPAPDHASGAAARAADDNGGIKGKRPSKK 415