Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  282 bits (722), Expect = 1e-80
 Identities = 162/409 (39%), Positives = 248/409 (60%), Gaps = 12/409 (2%)

Query: 23  MSFSSLALSADLIQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           M+F+SL L   L++AL       P+ +QT  IP +L G+D+ A A TG+GKT  + LPLL
Sbjct: 1   MTFASLGLIEPLLRALEALGYQTPTPVQTQAIPPVLAGRDLMAAAQTGTGKTAGFALPLL 60

Query: 82  ERL-----KTSPEQ-QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNA 135
           +RL     K +P   +ALVL PTRELA QV E +      L L T    GGV    Q   
Sbjct: 61  QRLTMEGPKVAPNSIRALVLAPTRELADQVHESIRQYAEHLPLTTYAAYGGVSINPQMMK 120

Query: 136 LAENPNILVATTGRLFDL-TQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVR 194
           L    ++LVAT GRL DL  Q+ ++ +++ TL+LDEADR+LD+GF  +++ + +     R
Sbjct: 121 LRRGVDVLVATPGRLLDLHRQNAVKFSQLQTLILDEADRMLDLGFAEELRGIYAVLPKQR 180

Query: 195 QTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLK 254
           QT++ SATFSD+++L A Q++  P  +  +P N    +V++ +  V+K  K    + L+K
Sbjct: 181 QTLLFSATFSDEIRLLAAQMLNDPLTIEVSPRNVAASSVKQWVVTVDKKRKADLFIHLMK 240

Query: 255 QHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIA 314
           +H+W QVLVF   +   D L  +L   G+ A  +HGDK Q+ R+ AL  FK+   ++L+A
Sbjct: 241 KHRWGQVLVFAKTRVGVDQLVDRLQALGMNADGIHGDKPQATRQRALDRFKSNEVKILVA 300

Query: 315 TDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATR 374
           TD+ ARG+ I+ LP V+N +LP+ AE Y+HR+GRT RAG  G A+SLVC  E++ L+A  
Sbjct: 301 TDVAARGLDIDDLPTVVNLDLPIVAEDYIHRIGRTGRAGLTGEAISLVCADEVELLSAIE 360

Query: 375 TLTQRELPVQNLEGF-PVTDQPST---GESKRAPRDKQANRRTQNKKSV 419
            LT++ L  +  + F P    PST   G+  + P+  + ++ + +K+++
Sbjct: 361 VLTRQTLERKEEQDFEPEHRVPSTDASGQILKKPKKPKKSKVSGSKRNL 409