Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  240 bits (613), Expect = 5e-68
 Identities = 145/380 (38%), Positives = 217/380 (57%), Gaps = 8/380 (2%)

Query: 23  MSFSSLALSADLIQALPKAITEP-SAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           M F S + + +++QAL +   E  + IQ L IP +  G+DV A A TG+GKT A+ LP+L
Sbjct: 1   MKFESYSFAPEILQALAECGYETMTPIQRLAIPPVRRGQDVLASAQTGTGKTAAFALPIL 60

Query: 82  ERLKTSPEQQ------ALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNA 135
           ++L  +P+ +      AL+L PTREL  Q++  +      L L    + GG     Q   
Sbjct: 61  QKLLDTPKAREATKARALILAPTRELTEQIANNIKAYAKHLELAVTTVFGGGKTDVQAQK 120

Query: 136 LAENPNILVATTGRLFD-LTQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVR 194
           L +  +I+VAT GRL + L    L L  V  LVLDEADR+LDMGF   +Q L       R
Sbjct: 121 LRKGTDIIVATPGRLLEHLLAGNLSLAAVEFLVLDEADRMLDMGFIADIQKLIQACNKER 180

Query: 195 QTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLK 254
           QT+M SATFS  ++  A ++M+  T ++A+  N+    V + +Y V +  K + L  L+ 
Sbjct: 181 QTLMFSATFSGGVRKLADEIMKKHTVLTADRHNTAATTVSQVVYPVEQRRKRELLSELIG 240

Query: 255 QHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIA 314
           +  W +VLVF   +E+ + LT++LN  GI + V+H +K+Q  R  AL +F  G  +VL++
Sbjct: 241 RKNWQRVLVFSATREDCEKLTEELNLDGIPSAVIHSEKAQGTRRRALKDFTEGKIRVLVS 300

Query: 315 TDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATR 374
           T++ ARG+ I  L  V+NF+LP   E YVHRVGRT RAG+ G+A+S V   E   L    
Sbjct: 301 TEVAARGLDIPDLEYVVNFDLPFLPEDYVHRVGRTGRAGKSGVAISFVSREEERTLADIE 360

Query: 375 TLTQRELPVQNLEGFPVTDQ 394
            L  + L    + G+ V+++
Sbjct: 361 KLIGQRLKRIVMPGYEVSNR 380