Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., DEAD/DEAH box helicase (NCBI) from Rhodospirillum rubrum S1H

 Score =  240 bits (613), Expect = 5e-68
 Identities = 149/373 (39%), Positives = 213/373 (57%), Gaps = 14/373 (3%)

Query: 31  SADLIQALPKAITE-----PSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLERLK 85
           S DLI+ L +A+T       + IQ   IP  L G+DV  +A TG+GKT ++ LPLL+RL 
Sbjct: 6   SLDLIEPLARAVTALGYTVATPIQAGAIPPQLLGRDVLGIAQTGTGKTASFVLPLLQRLT 65

Query: 86  TSPEQQ------ALVLVPTRELAMQVSEVLTHVGTALG-LNTLCLCGGVDKTEQQNALAE 138
             P+ +      AL+L PTRELA Q++E +  +G  L  +    + GGVD   Q   +  
Sbjct: 66  KDPQPRVPGRPRALILTPTRELAQQITESIGDLGRTLSAIRCGVVVGGVDILRQTRMVQR 125

Query: 139 NPNILVATTGRLFDL-TQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQTV 197
              ILVAT GRL DL  +  + L  +  LVLDEADR+LDMGF P V+ +A+     RQTV
Sbjct: 126 GLEILVATPGRLQDLMNRKAVDLRAIEVLVLDEADRMLDMGFAPAVKKIAAVLPRKRQTV 185

Query: 198 MCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLKQ-H 256
           M SAT  +++      LM  P +V   P  S+   + + +  V + +K + L+ LL    
Sbjct: 186 MFSATLPNEVTGLVASLMNDPVRVEVAPAASVANRIDQRVLFVEQTNKRKLLLDLLGDAR 245

Query: 257 QWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATD 316
           +  + +VF   K  A+ L   L + G+ + V+HG+KSQ  R+ AL +FK+G  + L+ATD
Sbjct: 246 KVERAIVFTRTKHGANKLGIFLLEYGVKSDVIHGNKSQGARQRALNDFKSGKVRALVATD 305

Query: 317 LLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATRTL 376
           + ARGI ++ +  VINF+LP   E+YVHR+GRTARAG  GIALSL    EM  L A   +
Sbjct: 306 IAARGIDVDGITHVINFDLPNEPESYVHRIGRTARAGAAGIALSLCAPQEMPYLKAIEKV 365

Query: 377 TQRELPVQNLEGF 389
            +  + V +   F
Sbjct: 366 IKSRIDVDSTHAF 378