Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., DEAD/DEAH box helicase from Rhodopseudomonas palustris CGA009

 Score =  247 bits (630), Expect = 6e-70
 Identities = 153/400 (38%), Positives = 219/400 (54%), Gaps = 9/400 (2%)

Query: 24  SFSSLALSADLIQALPKA-ITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLE 82
           SF    L+  + +AL +     P+ IQ   IP  L G+DV  +A TG+GKT ++ LP+L 
Sbjct: 9   SFQEFGLADPIARALQEENYHTPTPIQAQTIPLALAGRDVVGIAQTGTGKTASFALPILH 68

Query: 83  RL------KTSPEQQALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNAL 136
           RL        S   + LVL PTREL+ Q+ +     G  + L+     GGV    Q  +L
Sbjct: 69  RLLQNRIKPASKTCRVLVLSPTRELSGQILDSFNAYGRHVHLSAALAIGGVPMGRQVRSL 128

Query: 137 AENPNILVATTGRLFDLTQ-SGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQ 195
               ++LVAT GRL DL Q + L+L +V  LVLDEADR+LDMGF   ++ + ++    RQ
Sbjct: 129 MGGVDVLVATPGRLLDLVQGNALKLTQVEFLVLDEADRMLDMGFINDIRKIVAKLPIKRQ 188

Query: 196 TVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLKQ 255
           T+  SAT   D+   A+Q++R P +V+  P +S  + + + +  ++  +K  AL  +LK 
Sbjct: 189 TLFFSATMPKDIADLAEQMLRDPARVAVTPVSSTVERINQRVIQLDHSAKPAALAQILKD 248

Query: 256 HQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIAT 315
            +  Q LVF   K  AD + K L +AGI A  +HG+KSQ+ RE  LA F+ G  + L+AT
Sbjct: 249 DKVNQALVFTRTKHGADKVVKGLARAGITADAIHGNKSQNYRERVLAAFRTGELRTLVAT 308

Query: 316 DLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATRT 375
           D+ ARGI ++ +  V+NF+LP   ETYVHR+GRTARAG  G A+SL    EM  L     
Sbjct: 309 DIAARGIDVDGVSHVVNFDLPNIPETYVHRIGRTARAGADGTAISLCAGEEMAYLRDIEK 368

Query: 376 LTQRELPVQNLEGFPVTDQPSTGESKRAPRDKQANRRTQN 415
           L +  LP ++    P      T    R PR        +N
Sbjct: 369 LIKVSLPKED-RRTPGAHAAPTPPPHRGPRQAPHGHSPRN 407