Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  270 bits (689), Expect = 9e-77
 Identities = 161/396 (40%), Positives = 234/396 (59%), Gaps = 15/396 (3%)

Query: 23  MSFSSLALSADLIQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           M F  L L+ ++++A+ +    E + IQ   IP +L GKD+ A A TG+GKT A+ LPL+
Sbjct: 1   MRFDELGLAPEILKAVTEMGYAEATPIQQQAIPLVLQGKDLKACAQTGTGKTAAFTLPLI 60

Query: 82  ERL------KTSPEQ---QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQ 132
           +RL        SP +   +AL+L PTRELA+QV E +          ++CL GGVD   Q
Sbjct: 61  QRLLHLDTASPSPAKHPVRALMLAPTRELALQVYESVKSYTKYTHFRSICLFGGVDIKPQ 120

Query: 133 QNALAENPNILVATTGRLFD-LTQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTA 191
              + +    +VAT GRL D + Q  +  N+V  LVLDEADR+LDMGF P +Q + +   
Sbjct: 121 IAEMKKGVEFVVATPGRLLDHVEQKSVSFNQVQALVLDEADRMLDMGFIPDIQRILNMLP 180

Query: 192 GVRQTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVA 251
             RQ+++ SATFS++++  A  ++++P  V     N +N  +   ++ V +  K   L+ 
Sbjct: 181 KTRQSLLFSATFSNEIQRLADTMLQSPILVEVARRNQVNDTITHRVHPVAETRKKDLLIK 240

Query: 252 LLKQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQV 311
           LL+  +  Q LVF+  K+    L ++L +AGI A  +HGDKSQ+ER  AL  FKNG  +V
Sbjct: 241 LLRSGEITQTLVFMRTKQGCGRLARELERAGIAADSIHGDKSQNERIKALDAFKNGGCKV 300

Query: 312 LIATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALN 371
           L+ATD+ ARG+ I+ LP VINFELP   E YVHR+GRT RAG+ G A+SLVC  E+  L 
Sbjct: 301 LVATDVAARGLDIDHLPYVINFELPHTPEDYVHRIGRTGRAGRQGNAISLVCAHEVGYLA 360

Query: 372 ATRTLTQRELPVQNLEGF-PVTD---QPSTGESKRA 403
               L + ++    + GF P  D    P +G+ +RA
Sbjct: 361 DIEKLIKMQIEQVAVAGFEPEMDYEYPPGSGKKRRA 396