Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  283 bits (723), Expect = 1e-80
 Identities = 166/419 (39%), Positives = 246/419 (58%), Gaps = 20/419 (4%)

Query: 23  MSFSSLALSADLIQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           M F+ L L A++++A+ +   TEP+ IQ   IPA+L G+D+ A A TG+GKT  + LP+L
Sbjct: 1   MLFTDLGLKAEILRAIAEQGYTEPTPIQQQAIPAVLAGRDLMACAQTGTGKTAGFTLPIL 60

Query: 82  ERL-----------KTSPEQQALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKT 130
           + L           + + + + L+L PTRELA+QV E +   G  L L ++ + GGV   
Sbjct: 61  QLLSQAQAGESPLNRLARKPRVLILAPTRELALQVEESVRTYGQHLPLKSMSMFGGVGMN 120

Query: 131 EQQNALAENPNILVATTGRLFD-LTQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQ 189
            Q  AL    +ILVA  GRL D + Q  L L+ +  LVLDEADR+LDMGF   ++ + + 
Sbjct: 121 PQIAALKRGVDILVACPGRLLDHINQRTLDLSGIEILVLDEADRMLDMGFIRDIRKILAL 180

Query: 190 TA--GVRQTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQ 247
               G RQ ++ SATFSD++K  A+  +  P  +     N+  + V + +  V++  K  
Sbjct: 181 LPPNGKRQNLLFSATFSDEIKELARSFLHDPQSIEVARRNTTVETVSQKVIHVDREKKKD 240

Query: 248 ALVALLKQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNG 307
            L+ L +   W QVL+F   K  AD+L+++L+K GI +  LHG+K+Q  R  AL EFK G
Sbjct: 241 VLLHLFENRGWNQVLIFTRTKHGADALSRRLDKEGIRSAALHGNKTQGARVRALTEFKEG 300

Query: 308 TTQVLIATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEM 367
               L+ATD+ ARGI I+ LP V+N+ELP  AE YVHR+GRT RAG  G A+SLVCH E 
Sbjct: 301 KLVALVATDIAARGIDIDQLPYVVNYELPNVAEDYVHRIGRTGRAGAEGEAISLVCHDER 360

Query: 368 DALNATRTLTQRELPVQNLEGFPVTDQPSTGESKRAPRDKQANRRTQ-NKKSVKQFQGK 425
           D L +   L +++L  + L GF    +PS   +   P+++   R+ Q  ++  +Q QG+
Sbjct: 361 DNLRSIERLIKKDLEKEVLPGF----EPSANPTPAPPQNRGGQRQGQGQRQGQRQGQGQ 415