Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  274 bits (700), Expect = 5e-78
 Identities = 164/385 (42%), Positives = 227/385 (58%), Gaps = 9/385 (2%)

Query: 23  MSFSSLALSADLIQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           M+F+ L L   L++AL       P+ +Q   IPA+L G D+ A A TG+GKT ++ LPLL
Sbjct: 1   MTFADLDLVPPLLEALDVLGYQTPTPVQEKAIPAVLAGGDLMAAAQTGTGKTASFALPLL 60

Query: 82  ERLKTSPEQ------QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNA 135
           +RL   PE       +AL+LVPTRELA QV +     G  L L +  + GGV    Q   
Sbjct: 61  QRLAHDPEPTASNSTRALILVPTRELAQQVCDSFVAYGQFLVLRSYAVYGGVSINPQMMK 120

Query: 136 LAENPNILVATTGRLFDL-TQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVR 194
           L +  +ILVAT GRL DL  Q+ +R ++V TLVLDEADR+LD+GF  ++ AL +     R
Sbjct: 121 LRKGVDILVATPGRLLDLHRQNAVRFDQVRTLVLDEADRMLDLGFARELNALFALLPKQR 180

Query: 195 QTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLK 254
           QT++ SATFSD ++  A QL++ P  +     N+  + +++ +  V+K  K+     L K
Sbjct: 181 QTLLFSATFSDAIRSMADQLLKKPLSIETARPNATARGIKQWVVPVDKKRKSALFCHLYK 240

Query: 255 QHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIA 314
             +W QVLVF+  ++  D L + L   GI A  +HGDK Q  R  AL  FK G  +VL+A
Sbjct: 241 HKKWDQVLVFVKTRKGVDELVETLTAKGIAAESIHGDKPQPARLRALESFKAGQVRVLVA 300

Query: 315 TDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATR 374
           TD+ +RG+ I+ LP V+NF+LP+  E YVHR+GRTARAG  G A+SLVC  E++ L A  
Sbjct: 301 TDVASRGLDIDDLPRVVNFDLPIVPEDYVHRIGRTARAGASGEAVSLVCADEVNLLGAIE 360

Query: 375 TLTQRELPVQNLEGF-PVTDQPSTG 398
            L  + L      GF P    P TG
Sbjct: 361 VLIGQPLSRIEQHGFEPDHRVPETG 385