Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., ATP-dependent RNA helicase RhlE from Klebsiella michiganensis M5al

 Score =  279 bits (714), Expect = 1e-79
 Identities = 159/376 (42%), Positives = 231/376 (61%), Gaps = 9/376 (2%)

Query: 23  MSFSSLALSADLIQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           MSF SL L+ ++++A+ +    EP+ IQ   IPA+L G+D+ A A TG+GKT  + LPLL
Sbjct: 1   MSFDSLGLNPEILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL 60

Query: 82  ERL-------KTSPEQQALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQN 134
           + L       K     +AL+L PTRELA Q+ E +      L + +L + GGV    Q  
Sbjct: 61  QHLVQKEPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNVRSLVVFGGVSINPQMM 120

Query: 135 ALAENPNILVATTGRLFDLT-QSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGV 193
            L    +ILVAT GRL DL  Q+ + L++V  LVLDEADR+LDMGF   ++ + ++    
Sbjct: 121 KLRSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFIHDIRRVLAKLPAK 180

Query: 194 RQTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALL 253
           RQ ++ SATFSD++K  A++L+  P ++     N+ ++ V + ++ V+K  K + L  ++
Sbjct: 181 RQNLLFSATFSDEIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKRELLSQMI 240

Query: 254 KQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLI 313
            +  W QVLVF   K  A+ L ++LNK GI +  +HG+KSQ  R  ALA+FK+G  +VL+
Sbjct: 241 GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV 300

Query: 314 ATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNAT 373
           ATD+ ARG+ IE LP V+N+ELP   E YVHR+GRT RA   G ALSLVC  E   L+  
Sbjct: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLHDI 360

Query: 374 RTLTQRELPVQNLEGF 389
             L ++E+P   L G+
Sbjct: 361 ERLLKKEIPRIALAGY 376