Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., DEAD/DEAH box helicase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  246 bits (628), Expect = 1e-69
 Identities = 150/377 (39%), Positives = 213/377 (56%), Gaps = 8/377 (2%)

Query: 28  LALSADLIQALP-KAITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLERL-- 84
           L LS  L+  L  + IT+P+ IQT  IP  L G+DV  +A TG+GKT A+GLPLL+ L  
Sbjct: 2   LGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDALMK 61

Query: 85  ---KTSPEQ-QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNALAENP 140
              K +P   + L+L PTREL  Q+ E L        L    + GGV    Q        
Sbjct: 62  AGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIKRAERGA 121

Query: 141 NILVATTGRLFDLT-QSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQTVMC 199
           +++VAT GRL DL  +  LRL+    LVLDEAD++LD+GF   ++ +A      RQT++ 
Sbjct: 122 DLIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHALRKIAPLLPAERQTMLF 181

Query: 200 SATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLKQHQWP 259
           SAT    ++  ++  +  P +V   P   I   + ++++ V +G+KTQ L+ LL  H+  
Sbjct: 182 SATMPKQMEELSRAYLTDPARVEVAPPGKIADKITQSVHFVEQGAKTQLLIDLLGNHRDE 241

Query: 260 QVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATDLLA 319
             LVF   K  AD L +KL+ AG     +HG++SQ +RE AL  F+ GT +VL+ATD+ A
Sbjct: 242 LALVFSRTKHGADRLARKLSNAGFETAAIHGNRSQGQRERALKAFREGTLKVLVATDVAA 301

Query: 320 RGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATRTLTQR 379
           RGI I  +  V NF+LP   E +VHR+GRTARAG+ G A++     EM  L A + +   
Sbjct: 302 RGIDIPDVRFVYNFDLPNVPENFVHRIGRTARAGRDGQAVAFCAPEEMGELRAVQKVMGL 361

Query: 380 ELPVQNLEGFPVTDQPS 396
            LPV     + V D+PS
Sbjct: 362 TLPVAGGTPWEVMDEPS 378