Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., ATP-dependent RNA helicase from Caulobacter crescentus NA1000

 Score =  247 bits (630), Expect = 6e-70
 Identities = 145/366 (39%), Positives = 210/366 (57%), Gaps = 8/366 (2%)

Query: 25  FSSLALSADLIQALP-KAITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLER 83
           FS L L+  L++AL  K   EP+ IQ   IP +L GKD+  +A TG+GKT A+ LP+L+R
Sbjct: 4   FSDLGLAKPLLKALAEKGYKEPTPIQAQAIPVVLQGKDLLGIAQTGTGKTAAFALPILQR 63

Query: 84  L----KTSPEQ--QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNALA 137
           L    K +P +  + LVL PTRELA Q++E        +GL+   + GGV    Q  ALA
Sbjct: 64  LAEDRKPAPRRGCRCLVLSPTRELATQIAENFKAYAVHMGLSVHTIYGGVKYGPQMKALA 123

Query: 138 ENPNILVATTGRLFD-LTQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQT 196
              ++LVAT GRL D + +    ++     VLDEAD++LD+GF   ++ +A+Q    RQ 
Sbjct: 124 GGIDVLVATPGRLMDHMAEKSAIVSGTEIFVLDEADQMLDLGFVVPIRKIAAQLTKNRQN 183

Query: 197 VMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLKQH 256
           +  SAT   ++   A +L+  P QVS  P+ +  + + + +  +    K   L  L    
Sbjct: 184 LFFSATMPSEIGKLAGELLNNPVQVSVAPQATTVERIDQRVLFIEAQRKRPLLAELFADT 243

Query: 257 QWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATD 316
            + + +VF   K  AD + K LN AGI A  +HGDK+Q +RE ALA FK G  + L+ATD
Sbjct: 244 SFSRTIVFTRTKRGADRVAKYLNAAGIEAASIHGDKTQGQRERALAAFKAGEMRALVATD 303

Query: 317 LLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATRTL 376
           + ARGI +  +  VIN+ELP   E YVHR+GRTAR G+ GIA+S     E + L   +  
Sbjct: 304 IAARGIDVNDVSHVINYELPNVPEAYVHRIGRTARKGKDGIAISFCADDERNLLKDIQKA 363

Query: 377 TQRELP 382
           T++ +P
Sbjct: 364 TRQTIP 369