Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., DEAD/DEAH box helicase from Ralstonia sp. UNC404CL21Col

 Score =  235 bits (599), Expect = 3e-66
 Identities = 148/418 (35%), Positives = 218/418 (52%), Gaps = 39/418 (9%)

Query: 24  SFSSLALSADLIQALPKA-ITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLE 82
           +F++L L   +++AL +   T P+ +Q   IPA L+G+D+   + TGSGKT A+ LP ++
Sbjct: 34  AFAALGLDDRIVRALGEVNYTTPTPVQAQAIPACLSGRDLLVTSQTGSGKTAAFILPAIQ 93

Query: 83  RLKTSPEQQA------------------------LVLVPTRELAMQVSEVLTHVGTALGL 118
           R+   PE Q                         LVL PTRELA+QV+      G  L  
Sbjct: 94  RISEQPEPQRPRMDGPPQRMKGRRPRPAPAKPSLLVLTPTRELALQVTTATAQYGRHLR- 152

Query: 119 NTLC--LCGGVDKTEQQNALAENPNILVATTGRLFDLTQSG-LRLNRVTTLVLDEADRLL 175
             +C  + GG+   +Q + LA  P+I++AT GRL D   SG + L+ +  LV DEADR+L
Sbjct: 153 RIVCASILGGMPYPKQLDMLARMPDIIIATPGRLLDHIDSGRIDLSALDMLVFDEADRML 212

Query: 176 DMGFWPQVQALASQTAGVRQTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQE 235
           DMGF   ++A+   T   RQ +M SAT    ++  A+++MR P ++           ++E
Sbjct: 213 DMGFSDDIEAIVGATPATRQMLMFSATMDRRIEQLAERMMREPQRIEIAAAKIDQSNIEE 272

Query: 236 TLYLVNKGS-KTQALVALLKQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQ 294
            L+  +  S K Q L  LL+     Q +VF   K +ADSL ++L + G  A  LHGD  Q
Sbjct: 273 RLHFTDDMSHKQQLLDHLLRDASLKQAIVFTATKRDADSLAERLTEHGFSAGALHGDMHQ 332

Query: 295 SEREAALAEFKNGTTQVLIATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQ 354
             R   L   + G  +VL+ATD+ ARGI +  +  V+NF+LP  AE YVHR+GRT RAG+
Sbjct: 333 GARNRTLTALRRGQLRVLVATDVAARGIDVPDITHVVNFDLPKQAEDYVHRIGRTGRAGR 392

Query: 355 HGIALSLVCHGEMDALNATRTLTQRELPVQNLEGFPVTDQPSTGESKRAPRDKQANRR 412
            GIA++LV H +            R +    +EG          E KR+P+ +    R
Sbjct: 393 SGIAINLVNHNDTFQWRRIERFVDRRIDASVVEGL---------EPKRSPKPRTGGPR 441