Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., DEAD/DEAH box helicase from Burkholderia phytofirmans PsJN

 Score =  268 bits (685), Expect = 3e-76
 Identities = 162/406 (39%), Positives = 232/406 (57%), Gaps = 14/406 (3%)

Query: 24  SFSSLALSADLIQALPKA-ITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLE 82
           +F    L+ D+++A+ ++  T P+ IQ   IP +L G+D+   A TG+GKT ++ LP+++
Sbjct: 12  TFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTGKTASFSLPIIQ 71

Query: 83  RL------KTSPEQ---QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQ 133
           RL        SP +   +AL+L PTRELA QV+  +        L +  + GGVD   Q 
Sbjct: 72  RLLPQASTSASPARHPVRALILTPTRELADQVAANVQAYAKHTALRSAVVFGGVDMNPQS 131

Query: 134 NALAENPNILVATTGRLFD-LTQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAG 192
             L     IL+AT GRL D + Q    L +V  LVLDEADR+LDMGF P +Q + +    
Sbjct: 132 EQLRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPK 191

Query: 193 VRQTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVAL 252
            RQT++ SATFS ++K  A   +R P  +     NS    V + +Y V +G KT A+V L
Sbjct: 192 ERQTLLFSATFSGEIKKLAATYLRNPQTIEVARSNSTATNVTQVVYEVAEGDKTGAVVQL 251

Query: 253 LKQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVL 312
           +++    QV+VF  +K  A  L + L + G+VAT +HGD++Q+ER  AL  FK G  + L
Sbjct: 252 IRERGLKQVIVFCNSKIGASRLARSLERDGVVATAIHGDRTQNERMQALDAFKRGEIEAL 311

Query: 313 IATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNA 372
           +ATD+ ARG+ I  LP VINF+LP +AE YVHR+GRT RAG  G ALSL    E   L  
Sbjct: 312 VATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQLAD 371

Query: 373 TRTLTQRELPVQNLEGFPVTDQPSTGESKRAPRDKQANRRTQNKKS 418
              L +R L VQ L    V         +RAPR ++++   +++ S
Sbjct: 372 IEKLIKRPLDVQRL---TVEAPVRHHHEERAPRRERSSEGREDRGS 414