Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  252 bits (644), Expect = 1e-71
 Identities = 146/377 (38%), Positives = 218/377 (57%), Gaps = 8/377 (2%)

Query: 23  MSFSSLALSADLIQALPKA-ITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           M F S +   ++++A+      + + IQ   IPA+  G+DV A A TG+GKT A+ LP+L
Sbjct: 1   MRFESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPIL 60

Query: 82  ERLKTSPEQ------QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNA 135
           +++  +P +      + L+L PTRELA QV++ +      L  + L + GGV    Q   
Sbjct: 61  QKMVENPSETLKSNARVLILTPTRELAAQVADNVEAYSKYLNFSVLTIYGGVKVETQAQK 120

Query: 136 LAENPNILVATTGRLFD-LTQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVR 194
           L    +I+VAT GRL + LT   L L+ +  LVLDEADR+LDMGF   +Q +       R
Sbjct: 121 LKRGADIIVATPGRLLEHLTACNLSLSSIDFLVLDEADRMLDMGFNADIQKILQAVNKKR 180

Query: 195 QTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLK 254
           Q ++ SATFS  +K  A  +M  P  +SA+ +N+    V + +Y V +  K + L  L+ 
Sbjct: 181 QNLLFSATFSSAVKKLANDMMVKPQVISADKQNTTADTVSQVVYPVEQRRKRELLSELIG 240

Query: 255 QHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIA 314
           +  W QVLVF   ++ AD+L K+LN  GI + V+HG+K+Q  R  AL EF +G  +VL+A
Sbjct: 241 KKNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVA 300

Query: 315 TDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATR 374
           T++ ARG+ I  L  V+NF+LP  AE YVHR+GRT RAG+ G+A+S V   E   L    
Sbjct: 301 TEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIE 360

Query: 375 TLTQRELPVQNLEGFPV 391
            L  +++    + G+ V
Sbjct: 361 KLIGQKIRRITVPGYEV 377