Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  269 bits (688), Expect = 1e-76
 Identities = 162/402 (40%), Positives = 232/402 (57%), Gaps = 8/402 (1%)

Query: 23  MSFSSLALSADLIQALPKA-ITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           M F +L LS+ ++ A+ +    + + +Q  VIP  L GKD+ A A TG+GKT ++ LP+L
Sbjct: 22  MKFDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVL 81

Query: 82  ERLKTSPEQQ----ALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNALA 137
           E+L   P  +    ALV+ PTRELA+QV   +      L L TL + GG +   Q+  + 
Sbjct: 82  EQLSKQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVE 141

Query: 138 ENPNILVATTGRLFDLT-QSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQT 196
           +  +ILVAT GRLFD+  Q  L L+ VTTLV+DEADR+LD+GF   ++ +    A   QT
Sbjct: 142 QGVDILVATPGRLFDIIGQFHLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIATEHQT 201

Query: 197 VMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLKQH 256
           ++ SAT+SD +K  + +++  P  V+   EN+    V++ +Y V+K  K + L  L+ ++
Sbjct: 202 MLFSATYSDAVKQLSHKMLNQPEWVNV-AENTTASTVEQLVYRVDKRRKAELLSELVGRN 260

Query: 257 QWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATD 316
            W QVLVF   KE A+ L ++L   GI A V HGDK+Q  R   L +FK G  +VL+ATD
Sbjct: 261 NWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATD 320

Query: 317 LLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATRTL 376
           + ARG+ I+ LP+VIN ELP  AE YVHR+GRT RAG  G A+S V   + + L     L
Sbjct: 321 VAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEMLAEIEAL 380

Query: 377 TQRELPVQNLEGFPVTDQPSTGESKRAPRDKQANRRTQNKKS 418
             + LPV    G+     P     + AP D     +   K S
Sbjct: 381 IGQTLPVTVQPGYE-EGTPLPARYREAPTDTTKTAKWNYKSS 421