Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  407 bits (1045), Expect = e-118
 Identities = 227/441 (51%), Positives = 296/441 (67%), Gaps = 24/441 (5%)

Query: 8   IIRPTLFFEYSGIQPMSFSSLALSADLIQALPKAITEPSAIQTLVIPAMLTGKDVFALAN 67
           I++P+   E S  + ++F+ L +++ L   LP  +  P+ +Q L IPA+L G+DV AL+ 
Sbjct: 3   ILKPSTSPEPSP-ESLTFAELGINSALCSVLPAGLKHPTRVQQLAIPAILAGRDVLALSQ 61

Query: 68  TGSGKTLAYGLPLLERLKTSPEQ--------QALVLVPTRELAMQVSEVLTHVGTALG-- 117
           TGSGKTLA+GLPLL+ +    E         QALVLVPTRELA QV+  L  + T L   
Sbjct: 62  TGSGKTLAFGLPLLQAIHQQLESVSSSACKAQALVLVPTRELAQQVTMALQALATQLSPV 121

Query: 118 -LNTLCLCGGVDKTEQQNALAENPNILVATTGRLFDL-TQSGLRLNRVTTLVLDEADRLL 175
            LN   LCGG+ + EQ   L   P ++VAT GRL DL TQS + L+ +  LVLDEADRLL
Sbjct: 122 PLNIQLLCGGIAQEEQLVELTAKPQLIVATPGRLLDLCTQSHISLDSIKYLVLDEADRLL 181

Query: 176 DMGFWPQVQALASQTAGVRQTVMCSATFSDDL-KLKAQQLMRAPTQVSANPENSINQAVQ 234
           +MGFWP VQ L +     +QT++ SAT  + L  L  + L   P +V A+  N++   ++
Sbjct: 182 EMGFWPDVQKLMAMMPKRKQTLLFSATLPEALDSLAGKLLTNNPQRVEASTRNAVAADIE 241

Query: 235 ETLYLVNKGSKTQALVALLKQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQ 294
           E LYLVNKGSK QAL+ALLKQ++WPQVLVFI A+++AD++ K+L KAGI A  LHG+K Q
Sbjct: 242 ERLYLVNKGSKAQALIALLKQYRWPQVLVFISARDDADAIAKRLLKAGINAAALHGEKDQ 301

Query: 295 SEREAALAEFKNGTTQVLIATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQ 354
           + R   LA+FK    QV++ATDL+ARGIH++ LPVVIN +LP  A  YVHR+GRTARAG 
Sbjct: 302 TVRSQTLADFKAHRIQVVVATDLMARGIHVDALPVVINLDLPTSAPVYVHRIGRTARAGA 361

Query: 355 HGIALSLVCHGEMDALNATRTLTQRELPVQNLEGFPVTDQPSTG----------ESKRAP 404
           +G+A+SLVCHGEM +L A R LT RELP+ +L  FPVTD+PS              KR P
Sbjct: 362 NGLAISLVCHGEMLSLTAIRNLTARELPLASLADFPVTDKPSERAREGGTDNKVAPKRPP 421

Query: 405 RDKQANRRTQNKKSVKQFQGK 425
           RDKQANRR+ NK SVK F+GK
Sbjct: 422 RDKQANRRSLNKHSVKAFKGK 442