Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., DNA-damage-inducible protein F from Pseudomonas fluorescens FW300-N2E2

 Score = 75.5 bits (184), Expect = 3e-18
 Identities = 84/341 (24%), Positives = 148/341 (43%), Gaps = 34/341 (9%)

Query: 12  KQLFQMTWPMLFGVLSLMSFQLVDSAFIG------QLGVLPLAAQGFTMPIQMVIIGIQV 65
           ++++ +  PM+   +S+    LVDS  IG      QLG + + A  +T     V+     
Sbjct: 15  RRVWALAAPMILSNISVPLVALVDSTVIGHLPHAHQLGAVAVGASLYT-----VLAWAMG 69

Query: 66  GLGIATTAVISRAIGAGKTEYAKQL--------GGLVIVIGGIGVALIALVLYLLRQPLL 117
            L + TT   ++A G G     +Q+         GL +++G +GV L  + L+ + QP  
Sbjct: 70  FLRMGTTGFAAQAAGRGDGAALRQVLLQGLLLAMGLAVLLGAVGVPLSDVALHFM-QPSA 128

Query: 118 GLLGAPETVFAIIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLIL 177
            L       F    H  L+ L +A     L  ++   +   N   P  +++VT+++N+ L
Sbjct: 129 ELNQLTRDFF----HTRLFGLPAALASYALVGWFLGAQ---NARAPLAILLVTNLVNIAL 181

Query: 178 DPIFIFTFDLGIDGAAIATIIAFGVG--IAIVAPKVAQRQWT-SYQWQDLNISQSLTALG 234
           +  F+   D G+ G+A A++IA   G  + +   +   R W     W  L + QS   L 
Sbjct: 182 NLWFVIGLDWGVTGSARASVIAEWTGALVGLALARHTLRAWPGQIAWAALGLWQSWRPLL 241

Query: 235 HIMGPAMLSQLLPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMI 294
            +     +  L+        T   A  G A VAA AL          A+  +  ++  + 
Sbjct: 242 AVNRDIFIRSLVLQAVFFLITVQGARLGDATVAANALLLNGLLLTAHALDGLAHAVEALC 301

Query: 295 GRMLGAKEITHIRQLVRIACQF----VLGFQLLIALVTYVF 331
           G  +GA++   +R+ + +AC +     LGF LL  L  ++F
Sbjct: 302 GHAIGARDRLALRRSLVVACGWSLIASLGFALLFLLAGHLF 342