Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., MATE efflux family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  218 bits (554), Expect = 4e-61
 Identities = 135/428 (31%), Positives = 224/428 (52%), Gaps = 10/428 (2%)

Query: 7   TSSLAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQGFTMPIQMVIIGIQVG 66
           T+ +A  L +MT P + G+L+++ F LVD+ F+ QLG   LAA  FT P+ +V+  I VG
Sbjct: 9   TAPIAGVLLKMTLPNMLGILTILGFSLVDTFFVSQLGTEALAAISFTFPVTLVLSSIAVG 68

Query: 67  LGIATTAVISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLGLLGAPETV 126
           +G   +  + R IG+G    AK      +++    V  +A +  +   PL  LLGA E  
Sbjct: 69  IGAGVSTNLGRLIGSGHAPDAKVFLHDALLLTFAIVGTLASLGLMFIDPLFSLLGANEQS 128

Query: 127 FAIIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTFD 186
             +I  Y L W   +    +L       R+ G+T  P  +M + +++NLILDP+ IF   
Sbjct: 129 LPLIHEYMLVWYLGSPLLVLLMVGNQGLRSTGDTKSPAKIMALAAIINLILDPLLIFGLG 188

Query: 187 ----LGIDGAAIATIIAFGVGIAIVAPKVAQRQW----TSYQWQDLNISQSLTALGHIMG 238
               L I GAAIA++I++ + +++ +  +  ++     T   W  L    +   L HI  
Sbjct: 189 PFPRLEIQGAAIASVISWVLAMSLSSYLLIVKRHMLALTEIAWPRLK--DNWRKLAHIAQ 246

Query: 239 PAMLSQLLPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRML 298
           PA L  L+ P+++     +LA     AVAA+  G+R E   L+ V+A++ SL P + + L
Sbjct: 247 PAALMNLMNPIANAVIMAMLARIDHGAVAAFGAGTRLESVLLIVVMALSSSLMPFVAQNL 306

Query: 299 GAKEITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLVIVPI 358
           GA +    R  + ++ +FVL FQ L+ L   + A P+A L + E +V + L  +++ +P 
Sbjct: 307 GAGQHQRARDALMMSLRFVLLFQFLLYLPLLLLAGPIAGLFSDEPKVVEWLTFYIIALPA 366

Query: 359 SLGALGICMLMVSVANALGKSYVALTISALRLFAFYLPCLWLGAHFYGIEGLFIGALVGN 418
           + G LG+ ++  +  NA  +   +L I+  RLF   LP   LG+  YG++GL +   V N
Sbjct: 367 AYGPLGVVIITATALNAFHRPLASLIINVCRLFLLMLPLCALGSFLYGVKGLMVALPVTN 426

Query: 419 IIAGWAAW 426
            + G A +
Sbjct: 427 ALMGIACY 434