Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., multi anti extrusion protein MatE (RefSeq) from Shewanella amazonensis SB2B

 Score = 78.2 bits (191), Expect = 5e-19
 Identities = 94/435 (21%), Positives = 186/435 (42%), Gaps = 31/435 (7%)

Query: 10  LAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQ-LGVLPLAAQGFTMPIQMVIIGIQVGLG 68
           +++  ++ T P +  +L    +  +D  F+G  LG   LA      P+  ++  +   +G
Sbjct: 12  VSRLFWRYTLPTIASMLVTGIYVTIDGMFVGHFLGETGLAGIMLAYPVGALLYAVGALIG 71

Query: 69  IATTAVISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLGLLGAPETVFA 128
           +   A++S  +G GKT  A++L G    +  +      LV  +  + +L  LGA   V  
Sbjct: 72  MGAGALVSIKLGEGKTAKARELLGNAFSLVLLSALFFTLVGSVSARHILIWLGAEGEVLE 131

Query: 129 IIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTFDLG 188
               Y  W+ A      +   + ++ R +G       +++   V+N +LD +FI  +D G
Sbjct: 132 SAHDYLFWYFALCIFPLISMAFSTLLRNDGKPAFVTWVLIAGGVINTLLDYLFIVVWDFG 191

Query: 189 IDGAAIATIIAFGV-GIAIV----APKVAQRQWTSYQWQDLNISQSLTALGHIMGPAMLS 243
           + GA++AT+++  V G+  +    + K A R    ++   L +   L  +  +  P++L 
Sbjct: 192 LAGASVATMLSQAVTGLLCLQHFFSGKTALR--IDFEQMRLKLDNCLN-ISRVGLPSLLM 248

Query: 244 QL-LPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRMLGAKE 302
            L L  + ++  T LL       VAA+ + S  E F  +    + +   P++    GA  
Sbjct: 249 NLYLSIVLTLHNTALLWVGTPLHVAAYGVVSYTEAFFYLIFEGIALGSQPVLSFNAGAGR 308

Query: 303 ITHIRQLVRIACQFVL---GFQLLIAL-----VTYVFA--TPLAELMTSETEVSQILNLH 352
           +  +RQ   +A    L   G  LL          Y+FA   P+   +  E      + L+
Sbjct: 309 MDRVRQTRNLAMAVTLLTAGLGLLFIYGRPEWALYIFAGDNPVLSPVAIEG-----MRLY 363

Query: 353 LVIVPISLGALGICMLMVSVANALGKSYVALTISALRLFAFYLPCLWLGAHFYGIEGLFI 412
              +P      G+ ++  S   A+ K   A  ++  +L       ++  A  +G+ G+++
Sbjct: 364 FWGLPFE----GLILVGASFFQAINKPREASILTGTKLL-LIAAVIYSFAWLFGVPGVWV 418

Query: 413 G-ALVGNIIAGWAAW 426
             A V +++  W  +
Sbjct: 419 SLACVSSVLTLWMVY 433