Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., putative multi antimicrobial extrusion protein from Phaeobacter inhibens DSM 17395

 Score =  184 bits (466), Expect = 6e-51
 Identities = 127/426 (29%), Positives = 206/426 (48%), Gaps = 26/426 (6%)

Query: 12  KQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQGFTMPIQMVIIGIQVGLGIAT 71
           + L  ++ PM  G+L ++S  L D+ F+GQLG  PLAA GF  P+   +  + +GL    
Sbjct: 13  RALAAVSAPMSLGILGVLSVGLADAYFLGQLGEAPLAAVGFIYPVTTAVTSLSIGLSAGA 72

Query: 72  TAVISRAIGAGKTEY-AKQLGGLVIVIGGIGVALIALVLYLLRQPLLGLLGAPETVFAII 130
            A IS+++G G +     +L    IV+G +   L+ALV YL    L  ++GA + V A  
Sbjct: 73  NAAISQSLGRGDSAIETNRLSVHAIVLGTLVATLVALVFYLGAGALFSVMGAKDDVLAEA 132

Query: 131 DHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTF----D 186
             Y  +W  S      +    +V RA+G+      +MMV + LN+ LDP+ I+      +
Sbjct: 133 QSYAPFWALSFPFLVGMALLNAVFRAHGDGATSAVIMMVAAALNIALDPVLIYGLGPVPE 192

Query: 187 LGIDGAAIATIIA--------FGVGI---AIVAPKVAQRQWTSYQWQDLNISQSLTALGH 235
           +   GAA+AT +A        FG  +    I  P+V              I  S+  +  
Sbjct: 193 MSTAGAALATALARVLTLIGAFGYALRTGVIRPPEVFTD----------GIGGSVREVIR 242

Query: 236 IMGPAMLSQLLPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIG 295
           +  PA  S  + P      T   A+ G   VA      R +  ALV +LA++  + P++G
Sbjct: 243 VGLPAAFSNAINPAGMAMVTAAAATLGDTVVAGLGAAQRVQSVALVPLLALSAGIGPVVG 302

Query: 296 RMLGAKEITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLVI 355
           +  GA +    R  V  + QF +G+ L +ALV  +FA+ +A L+TS+   +     +L I
Sbjct: 303 QNWGADQQMRARLAVWQSWQFCIGYGLAMALVLTLFASDIAGLLTSDQGAAATTAQYLRI 362

Query: 356 VPISLGALGICMLMVSVANALGKSYVALTISALRLFAFYLPCLWLGAHFYGIEGLFIGAL 415
           V  S    G+ +   +  NA  K+  ++ +S +R+FA Y+P  WLG   +G  G+   A+
Sbjct: 363 VSWSFLGYGVLVTANAAMNARSKAVWSMGLSLMRIFAIYVPLAWLGVWIFGYAGILGAAV 422

Query: 416 VGNIIA 421
           + N+ A
Sbjct: 423 IANLAA 428