Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., DNA-damage-inducible protein F from Phaeobacter inhibens DSM 17395

 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 102/444 (22%), Positives = 188/444 (42%), Gaps = 36/444 (8%)

Query: 12  KQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLG-VLPLAAQGFTMPIQMVIIGIQVGLGIA 70
           K++ ++  P++    ++     VD+  +GQ+G   P+ A G    I   I  I   L + 
Sbjct: 15  KRVLKIALPIVLSNATVPILGAVDTGVVGQMGQAAPIGAVGIGAVILATIYWIFGFLRMG 74

Query: 71  TTAVISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLL-----GLLGAPET 125
           TT + ++A GAG  ++A + G L+    G+ +A  A  +++  Q  +      L  A   
Sbjct: 75  TTGLAAQARGAG--DWA-ETGALLT--RGVLLAFAAGAVFIAGQAAVFWGAFALAPASAE 129

Query: 126 VFAIIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTF 185
           V  +   Y    +  A     LY       A   T     L +  + LN++LD  F+   
Sbjct: 130 VEGLARSYLEIRIWGAPATIALYAVTGWLIAVERTRGVFVLQIWMNGLNILLDLWFVLGL 189

Query: 186 DLGIDGAAIATIIA----FGVGIAIVAPKVAQRQWTSYQWQDLNISQSLTALGHIMGPAM 241
             G++G A AT+IA      +G+ +     A RQW +  W  +     L  +  + G  M
Sbjct: 190 GWGVEGVAAATLIAEWSGLALGLWLCRDAFAGRQWRN--WARVFDPARLKRMMQVNGDIM 247

Query: 242 LSQLLPPLSSMFATKLL--ASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRMLG 299
           +  +L  L+  F T L   A  G   +AA  +  +F      A+     S   ++G  +G
Sbjct: 248 IRSVL--LTGSFTTFLFIGADLGDVTLAANQVLLQFVEITAFALDGFAFSAEALVGSAVG 305

Query: 300 AKEITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLVIVPIS 359
           AK    +R+   +A Q+ +G  +++ L+ ++    L ++M++   V      +L+   + 
Sbjct: 306 AKARMQLRRAAIVASQWGVGGAIVLGLLFWLGGGWLIDVMSTSEAVRAAGRDYLIWAAV- 364

Query: 360 LGALGICMLMVSVANALGKS-YVALT------ISALRLFAFYLPCLWLGAHFYGIEGLFI 412
                  + ++SVA+ +    Y+  T      I+ L+  A Y+  L +     G  GL+ 
Sbjct: 365 -------LPLISVASYMFDGIYIGATWTRDMRIAMLQSVAIYVVALVVLVPSLGNHGLWA 417

Query: 413 GALVGNIIAGWAAWLAYQKALRQL 436
             +V N+  G    L Y +   Q+
Sbjct: 418 SLMVLNVARGVTLGLRYPRLEAQV 441