Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., MATE efflux family protein (RefSeq) from Shewanella loihica PV-4

 Score = 77.4 bits (189), Expect = 9e-19
 Identities = 96/441 (21%), Positives = 188/441 (42%), Gaps = 32/441 (7%)

Query: 6   STSSLAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQ-LGVLPLAAQGFTMPIQMVIIGIQ 64
           +T+ + K +++   P +  ++    +  +D  F+G  LG + LA      P+  ++  + 
Sbjct: 17  ATAPIPKLVWRYAIPTILSMVVTGVYVAIDGMFVGHYLGEVGLAGMMLAYPVGAILYAVG 76

Query: 65  VGLGIATTAVISRAIGAGKTEYAKQLGG---LVIVIGGIGVALIALVLYLLRQPLLGLLG 121
             +G+   +++S  +G      A+ L G    + ++ G G+AL+        Q +L  LG
Sbjct: 77  ALIGMGAASLVSINLGLKDVARARHLLGNAFTLCLLAGTGLALLGT---RWSQTILIWLG 133

Query: 122 APETVFAIIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIF 181
           A   V    + Y  W+ A      +   + ++ R +G       +++++  LN++LD + 
Sbjct: 134 AEGEVLTSAEQYLFWYFALGVFPVLAIAFTALLRNDGRPGFVTLVLILSGCLNVLLDWLL 193

Query: 182 IFTFDLGIDGAAIATII--AFGVGIAIVAPKVAQRQWTSYQWQDLNISQSLTALGHIMGP 239
           I  F  G+ GAAIAT+I  AF   +A +     +R      WQ + +  +L    +I+  
Sbjct: 194 IVVFPYGLAGAAIATMICQAF-TALACLQHFFTKRTRLGINWQQMRL--NLDHCSNILRV 250

Query: 240 AMLSQLLPPLSSMFATKLLASF----GTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIG 295
            + S L+    S+  T    +F    G   VAA+ + S  E    +    +     P+  
Sbjct: 251 GVPSFLMNLYLSIVLTLHNMAFLWVGGPIHVAAYGVVSYAEALFYLIFEGIAFGTQPLFS 310

Query: 296 RMLGAKEITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMT-----SETEVSQILN 350
              GAK    + + +R+    V+   L+ AL   VF     E +        +E++ +  
Sbjct: 311 FNTGAKRFDRVFETLRL----VIIMTLVTALAGVVFIYWAPEYLVYIFAGDNSELAPVAI 366

Query: 351 LHLVIVPISLGALGICMLMVSVANALGKSYVA--LTISALRLFAFYLPCLWLGAHFYGIE 408
             + +    L   G+ ++  +   A+ +   A  LT S L L A     L+L A  +G+ 
Sbjct: 367 EGMRLYFWGLPFEGLILVGAAFFQAINRPKEASILTGSKLVLIAM---VLYLFAWLFGVT 423

Query: 409 GLFIGALVGNIIAGWAAWLAY 429
           G++I     +++     W+ Y
Sbjct: 424 GVWISLASCSLLL--TIWMVY 442