Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

 Score =  145 bits (366), Expect = 3e-39
 Identities = 107/419 (25%), Positives = 200/419 (47%), Gaps = 6/419 (1%)

Query: 7   TSSLAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQ-LGVLPLAAQGFTMPIQMVIIGIQV 65
           T  + K L +++ P + G+L +  + +VD  FIG+ +G           P QM+I+   V
Sbjct: 10  TEDVKKLLVKLSVPAIIGMLIMALYNIVDGFFIGRWVGTAAFTGIALIFPFQMMIMAFGV 69

Query: 66  GLGIATTAVISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLGLLGAPET 125
             GI  ++++SR +G G  ++A++ GG  I    I   LI +V  +   P+L LLG    
Sbjct: 70  TFGIGGSSLLSRKLGEGNLDFARKAGGNAISSVLILSVLITIVGVVFMVPILNLLGTSAD 129

Query: 126 VFAIIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTF 185
           +F     Y+   L      + L    ++ RA G   +    M+V +++N+ILDPI I  F
Sbjct: 130 IFPYAKDYYEIILYGTIFNSYLVAANNLVRAEGMAKVAMFAMVVPAIINIILDPILIIVF 189

Query: 186 DLGIDGAAIATIIAFGVG-IAIVAPKVAQRQWTSYQWQDLNISQSLTALGHIMGPAMLSQ 244
           ++GI GAAIAT+++  +G I I+  +  +     Y   D  I+  +      +G +  ++
Sbjct: 190 NMGIKGAAIATVLSQIIGVIYILKHQFGKNTSIKYAMNDFLINLKILKETVFIGASEFAK 249

Query: 245 L-LPPLSSMFATKLLASF-GTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRMLGAKE 302
           L +  +  +    LL  + G  A+A + +  R     L+ VL +     P++G   G  +
Sbjct: 250 LIISSILLILGNNLLGIYGGDIAIAIYGVIMRIAMLLLMPVLGIVQGFQPIVGYNYGKGQ 309

Query: 303 ITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEV-SQILNLHLVIVPISLG 361
           +  + + +++A     G  LL  ++  +F     ++  ++ EV SQ +    +    S  
Sbjct: 310 LNRVSESIKLALVGTSGLCLLGFILVMIFPEKFIQIFITDPEVISQGVFATRIFFMFSF- 368

Query: 362 ALGICMLMVSVANALGKSYVALTISALRLFAFYLPCLWLGAHFYGIEGLFIGALVGNII 420
            +G  M +  +  +LGK+  A  IS  R   F +P L +   F+G+ G++    +G+++
Sbjct: 369 LIGAQMTIGGLYQSLGKAKPAFIISCARQTLFLMPALIILPLFFGLNGIWFSFPIGDLL 427