Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis JJ

 Score =  113 bits (282), Expect = 1e-29
 Identities = 105/439 (23%), Positives = 199/439 (45%), Gaps = 18/439 (4%)

Query: 12  KQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQGFTMPIQMVIIGIQVGLGIAT 71
           K + +++ PM+  +     + ++D+ ++  LG   LAA G   P    +I I  G+GI  
Sbjct: 16  KAIVKISLPMVIAMSFQSLYNIIDAIWVAGLGSDALAAIGLFFPFMFALIAISNGVGIGG 75

Query: 72  TAVISRAIGAGKTEYAKQLGGLVIVIGGI-GVALIALVLYLLRQPLLGLLGAPETVFAII 130
           ++ ISR IG    + A  +    IV+G I G+ L  ++ +L    +  L+GA      + 
Sbjct: 76  SSAISRRIGQKNKDAADNIAVHSIVLGIILGILLTGVIPFL--GTIFSLIGASGNTVTMA 133

Query: 131 DHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTFDLGID 190
             Y       A          ++ R  G+T      +++ SVLN++LDPIFI+  ++G+ 
Sbjct: 134 VEYSTILFGGAVALLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVLNMGVA 193

Query: 191 GAAIATIIAFGV-GIAIVAPKVAQRQ-WTSYQWQ----DLNISQSLTALGHIMGPAMLSQ 244
           GAA AT+++  + GI  V     ++  +    ++    D+NI + + ++G    PA +S 
Sbjct: 194 GAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGL---PASISH 250

Query: 245 LLPPLSSMFATKLLA-SFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRMLGAKEI 303
           L    S    T ++A + G   +A ++ G R      + ++ +   +  + G   G+   
Sbjct: 251 LTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANP 310

Query: 304 THIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLVIVP---ISL 360
             +    + A +  +  + +IA +  +F   +  L T       IL   LV +    +  
Sbjct: 311 EKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYMFLFY 370

Query: 361 GALGICMLMVSVANALGKSYVALTISALRLFAFYLPCLW-LGAHF-YGIEGLFIGALVGN 418
             L + ML  ++   + K   +L IS LR     +P  +  G  F  G+ G++ G ++G+
Sbjct: 371 PTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWFGMILGH 430

Query: 419 IIAGWAAWLAYQKALRQLE 437
           +IA   A+L     +RQ +
Sbjct: 431 VIAVSIAYLLGIYTIRQFK 449