Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., DNA-damage-inducible protein F (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 80/356 (22%), Positives = 149/356 (41%), Gaps = 30/356 (8%)

Query: 7   TSSLAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLG----VLPLAAQGFTMPIQMVIIG 62
           T+S  +++ Q+  P +   +++    L+D   +G LG    +  +A  G    I   I G
Sbjct: 6   TTSENRRILQIAVPSIISNITVPLLGLIDVTIVGHLGSPAYIGAIAVGGMLFNIIYWIFG 65

Query: 63  IQVGLGIATTAVISRAIGAGKTEYAKQLGGLVIVIGGIGVAL-IALVLYLLRQPLLG--- 118
               L + T+ + S+A G        +L     +I  +GV L IAL L +L+ P+L    
Sbjct: 66  F---LRMGTSGMTSQAYGQHDLNEINRL-----LIRSVGVGLFIALCLLILQYPILNAAF 117

Query: 119 -LLGAPETVFAIIDHYWLW--WLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNL 175
            L+   E V  +   Y+    W A A  G  LY +        N+  P  + +  +++N+
Sbjct: 118 TLIQTTEEVKQLATTYFYICIWGAPAMLG--LYGFAGWFIGMQNSRFPMYIAITQNIVNI 175

Query: 176 ILDPIFIFTFDLGIDGAAIATIIAFGVGIAIVAPKVAQRQWTSYQ----WQDLNISQSLT 231
           I    F++  D+ + G A  T+IA   G   +A  +  R +++ +    W+D+   Q++ 
Sbjct: 176 IASLSFVYLLDMKVAGVAAGTLIAQYAGF-FMAILLYMRYYSTLRKRIVWKDIIQKQAMY 234

Query: 232 ALGHIMGPAMLSQLLPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVL--AMTMS 289
               +        L   + +MF T   A+ G   +A   L    + F L + +      +
Sbjct: 235 RFFRVNRDIFFRTLCLVIVTMFFTSAGAAQGEVVLAVNTL--LMQLFTLFSYIMDGFAYA 292

Query: 290 LPPMIGRMLGAKEITHIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEV 345
              + GR +GA+  T +R  V     + +G      L+  +       L+T++  V
Sbjct: 293 GEALAGRYIGARNQTALRNTVNHLFYWGIGLSAAFTLLYAIGGKEFLGLLTNDVSV 348



 Score = 33.9 bits (76), Expect = 1e-05
 Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 2/142 (1%)

Query: 13  QLFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQGFTMPIQMVIIGIQVGLGIATT 72
           + F++   + F  L L+   +  ++     G + LA     M +  +   I  G   A  
Sbjct: 235 RFFRVNRDIFFRTLCLVIVTMFFTSAGAAQGEVVLAVNTLLMQLFTLFSYIMDGFAYAGE 294

Query: 73  AVISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLR-QPLLGLLGAPETVFAIID 131
           A+  R IGA + + A +     +   GIG++    +LY +  +  LGLL    +V +  D
Sbjct: 295 ALAGRYIGA-RNQTALRNTVNHLFYWGIGLSAAFTLLYAIGGKEFLGLLTNDVSVISSSD 353

Query: 132 HYWLWWLASAWTGAMLYFYYSV 153
            Y+ W LA   TG   + +  V
Sbjct: 354 TYFYWALAIPLTGFSAFLWDGV 375