Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  149 bits (376), Expect = 2e-40
 Identities = 108/424 (25%), Positives = 201/424 (47%), Gaps = 2/424 (0%)

Query: 9   SLAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQ-GFTMPIQMVIIGIQVGL 67
           S+ + +  M+     G+ +L    L+D  F+  LG   LAA  G+   I      I +GL
Sbjct: 10  SILRHILVMSSTAAVGISALFVVDLLDIFFLSLLGEHELAAAVGYAGSISFFTTSIGIGL 69

Query: 68  GIATTAVISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLGLLGAPETVF 127
            IA  A++SR+IGA   E AK+L      +  +    +++V+      L+ L+GA     
Sbjct: 70  SIALGALVSRSIGAKDVELAKRLLLNSAAVTTLISLFVSVVVTCFIPELVTLVGASGHTA 129

Query: 128 AIIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTFDL 187
            + + Y    + S     +        RA G+  L     +    +N +LDPIFIF F +
Sbjct: 130 ELAESYLYILVPSLPFICLAMALGGALRAVGDAKLSMMSTLAGGGVNAVLDPIFIFLFAM 189

Query: 188 GIDGAAIATIIAFGVGIAIVAPKVAQRQWTSYQWQDLNISQSLTALGHIMGPAMLSQLLP 247
           GI+GAA+A+++A      I    V  +     ++        L  +  I GPAML+ +  
Sbjct: 190 GIEGAALASVLARIAVFIIAGRGVVVKHQLLGKFNFSYFVADLKPIFAIAGPAMLTNIAT 249

Query: 248 PLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRMLGAKEITHIR 307
           P+ + F T+ +A FG A VA WA+  R        + A++ ++ P++G+  GA     +R
Sbjct: 250 PIGNAFVTRAIADFGDAYVAGWAVLGRLIPVTFGMIFALSGAIGPIVGQNFGAGRFDRVR 309

Query: 308 QLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLVIVPISLGALGICM 367
           + +  A QF   + ++++L+ ++  + +  L   + + + ++      + +     GI  
Sbjct: 310 ESLTKAIQFCTLYVVVMSLLLFLLKSQVVSLFDMKGDSAALIEFFCSYIAVFFTFSGILF 369

Query: 368 LMVSVANALGKSYVALTISALRLFAFYLPCLWLGAHFYGIEGLFIGALVGNIIAG-WAAW 426
           +  +  N LGK+  +   +  +     +P ++LGA + G+ G+ IG ++G+I+ G    W
Sbjct: 370 VANASFNNLGKAKYSTLFNVGKATLGTVPFVYLGAQWGGVYGVLIGQVLGSILFGVMGVW 429

Query: 427 LAYQ 430
           +AY+
Sbjct: 430 VAYR 433