Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  202 bits (515), Expect = 2e-56
 Identities = 127/360 (35%), Positives = 209/360 (58%), Gaps = 11/360 (3%)

Query: 166 AADRFFAGAGLPLMLV-----LTILMAYQFTRRL-----ETLSQEARKVFDNPLMELVYN 215
           AAD++ +   L + L+     LT+L A+  T  +     + LS        N    ++ +
Sbjct: 181 AADQYSSAFNLVVTLLVIATGLTLLFAWLLTNSITQPIAKALSAAEEIAEGNLTRPIIVD 240

Query: 216 GRVDDLSEIQLAMKMRQSELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETE 275
           G  D+   +  AM   Q +L   + RI  S+ Q+  AA+  +  +  +A  L  Q  E E
Sbjct: 241 GS-DEAGRLLQAMLKMQEKLRDTLQRISGSATQLASAAEELNSVTDESARGLTQQNNEIE 299

Query: 276 QLATAITQMNITATEIAHNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASS 335
           Q ATA+ +M     E+A NA + S+A+ +A  +A DG   V++TV AI  M++ +++ ++
Sbjct: 300 QAATAVNEMTSAVEEVARNAVSTSEASKNATTSAGDGRDLVQETVSAIERMSADVQSTAT 359

Query: 336 VIEQLSSQSAMIGQVMEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQR 395
           +I  L+++S  IG+V++VI+ +A+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA R
Sbjct: 360 LIGDLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHR 419

Query: 396 STESTKEIQEVITSIQTSTRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMR 455
           + +ST EI+ +I SIQ+ T +AV+++    + + S ++ A  +G  L  + S + +I  R
Sbjct: 420 TQQSTSEIERMIGSIQSGTEHAVDSMRNSTERAESTLNIARGAGLSLDTINSAIVEINER 479

Query: 456 NEQIATAIEEMANVTEDMNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQF 515
           N  IA+A EE A V  +++R++ +I D+S ++   A  T     +L+       ++V +F
Sbjct: 480 NLVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGANQTSAASNELSRLALDLNNMVGRF 539