Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  222 bits (566), Expect = 3e-62
 Identities = 134/343 (39%), Positives = 202/343 (58%), Gaps = 4/343 (1%)

Query: 178 LMLVLTILMAYQFTRR----LETLSQEARKVFDNPLMELVYNGRVDDLSEIQLAMKMRQS 233
           L LVL +L A+  TR+    L T   +  ++    L E     R D+L  +Q  ++   S
Sbjct: 297 LALVLGVLAAWLITRQIILPLRTTMADVERIASGDLSETAQIQRRDELGVLQRGIQQMGS 356

Query: 234 ELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEIAH 293
            L  ++G I+D   QI  AA+  S  +  T+  +++Q  ET+Q+ATA+ +M+ T  E+A 
Sbjct: 357 TLRELIGGIRDGVSQISAAAEELSAVTQQTSAGVNSQKEETDQVATAMHEMSATVQEVAR 416

Query: 294 NAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQVMEV 353
           NA+ A+ A   A + AR+G   V + V  I  MAS +  ++  +  L  +S  IG VM V
Sbjct: 417 NAEQAALAATEADSEAREGDRVVTEVVTQIERMASAVVRSTEAMTALQEESDKIGSVMNV 476

Query: 354 IQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSIQTS 413
           I+++AEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LAQR+ +ST+EI+ ++ ++Q  
Sbjct: 477 IRAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAALQNG 536

Query: 414 TRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTEDM 473
           T+     +     L+ S V+ A  +G  L ++   VS+I   N+QIA A EE + V E++
Sbjct: 537 TQQVASIMHTSRDLTDSGVELARRAGASLGSITRTVSNIQAMNQQIAAAAEEQSAVAEEI 596

Query: 474 NRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFR 516
           +RSV ++ DVS +T   +E T     +LA    Q   +V++FR
Sbjct: 597 SRSVVNVRDVSEQTAAASEETAASSTELARLGGQLQMMVSRFR 639