Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  202 bits (515), Expect = 2e-56
 Identities = 127/348 (36%), Positives = 199/348 (57%), Gaps = 14/348 (4%)

Query: 178 LMLVLTILMAYQFTRRLETLSQEARKVFDNPLMELVYNGRV---------DDLSEIQLAM 228
           L  + TI++A   TR +     EA  V      E++  G +         D+ + +  A+
Sbjct: 196 LAFIATIILAMLLTRSIVQPLAEAVGV-----AEVIAGGDLTRHFQVVGSDEPARLLSAL 250

Query: 229 KMRQSELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITA 288
           +  Q  L   +  I DSS Q+  AA+  +  +  +   L  Q  E EQ ATA+ +M    
Sbjct: 251 QAMQRSLRETIQGISDSSNQLASAAEELNVVTEDSTRGLHQQNHEIEQAATAVNEMTAAV 310

Query: 289 TEIAHNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIG 348
            E+A NA A S+A+  +   A+ G   V +TVD+IG +A  +   ++ +E+L+ Q   I 
Sbjct: 311 DEVARNAVATSEASRESDETAQHGRQQVIRTVDSIGLLADDVTQTATEVERLAGQVRDIS 370

Query: 349 QVMEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVIT 408
           +V++VI+SIAEQTNLLALNAAIEAARAGD GRGFAVVADEVR LA R+ +ST+EI+++I 
Sbjct: 371 KVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQEIEQMIG 430

Query: 409 SIQTSTRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMAN 468
            +   T  AV  ++  N+ + + ++ A  +G+ L  + S +S I+ RN  IA+A EE A 
Sbjct: 431 DVHQGTDKAVHAMQLSNERARTTLELARAAGEALDGIASAISQISERNLVIASASEEQAQ 490

Query: 469 VTEDMNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFR 516
           V  +++R++ +I D+S ++   A  T    ++LA       +LVA+F+
Sbjct: 491 VAREVDRNLVNIRDLSLQSSAGANQTSAASQELARLAIDLNNLVARFQ 538