Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  206 bits (523), Expect = 2e-57
 Identities = 124/344 (36%), Positives = 196/344 (56%), Gaps = 5/344 (1%)

Query: 173 GAGLPLMLVLTILMAYQFTRRLETLSQEARKVFDNPLMELVYNGRVDDLSEIQLAMKMRQ 232
           G GL  M++L  +     +R LE L Q A  V    L   +     D+++E+Q +++  Q
Sbjct: 200 GGGLFAMVLLRSI-----SRPLEELKQAAASVAAGDLSRTIACRGKDEITEVQQSIRQMQ 254

Query: 233 SELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEIA 292
             L   +  IQ S+ Q+  AA+     +  TA  +  Q  E +  ATA+T+M+    E+A
Sbjct: 255 QTLRDTLQDIQGSATQLASAAEELHAVTQHTAQGIHQQNEEVQMAATAVTEMSAAVDEVA 314

Query: 293 HNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQVME 352
            NA   SDA+  A+  A DG   V  T   I +++ +++  +  + +L+ ++A IGQV++
Sbjct: 315 GNANRTSDASRDAETVADDGRRQVTATRQTIDQLSEKLQQTAGTVTRLAEEAASIGQVVD 374

Query: 353 VIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSIQT 412
           VI++IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LAQR+  ST+EI+ +I +IQ+
Sbjct: 375 VIRAIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQSSTQEIERMIGAIQS 434

Query: 413 STRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTED 472
           +T  +V  ++Q ++ +      A  +   L  +  +V  I   N  IA+A EE A V  +
Sbjct: 435 ATEQSVRDMQQSSEFATRSQTMAGEADQALGLIAERVGQINEMNLVIASAAEEQAQVARE 494

Query: 473 MNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFR 516
           ++R++ +I D+S ++   A+ T     +LA        LV +FR
Sbjct: 495 VDRNLVAIRDISEQSATGAQQTSVASDELARLATHLNQLVGRFR 538