Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  214 bits (546), Expect = 5e-60
 Identities = 132/362 (36%), Positives = 212/362 (58%), Gaps = 6/362 (1%)

Query: 160 AAGVSFAADRFFAGAGLPLMLVLTILMAYQFTRRL-----ETLSQEARKVFDNPLMELVY 214
           AA  ++    +  G  + + ++ T+L+A+ +TR L     ++LS  A+++  N L + + 
Sbjct: 181 AANAAYQQTLWMVGIFITVGVITTLLLAWMYTRSLTGPIGDSLSI-AQRIATNDLSQDIP 239

Query: 215 NGRVDDLSEIQLAMKMRQSELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRET 274
               D+ +++  A+   QS L   +  I DSS Q+   ++     +   +  +  QT E 
Sbjct: 240 QHGTDEAAKLIAALATMQSNLRNALTLIGDSSTQLAATSEEMHAVTEDASRTILRQTNEI 299

Query: 275 EQLATAITQMNITATEIAHNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTAS 334
           E  ATA+ +M+    E+A NA +AS+ T  +  AA  G   V++TV AI  M S+++  S
Sbjct: 300 EMAATAVNEMSAAVEEVASNAASASEVTSQSSTAAMAGRAQVDETVTAINLMVSKVQITS 359

Query: 335 SVIEQLSSQSAMIGQVMEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQ 394
           + ++ L+  +  I +V++VI++IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA 
Sbjct: 360 TEVQGLAVMATDISKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAH 419

Query: 395 RSTESTKEIQEVITSIQTSTRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITM 454
           R+ +ST+EI++++ SIQT T NAV  +EQ +  +   ++ A+ +G  L  +   +S I  
Sbjct: 420 RTQQSTREIEQMVDSIQTGTGNAVSAMEQTSVQAHKTLEMANGAGKALLEITESISQINE 479

Query: 455 RNEQIATAIEEMANVTEDMNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQ 514
           RN  IATA EE A V  +++RS+ SI D+S++T   +  T     +L+   +    L  Q
Sbjct: 480 RNLMIATAAEEQAQVAREVDRSLVSIRDLSSQTSEGSNQTAIATAELSTLASSLNRLTKQ 539

Query: 515 FR 516
           FR
Sbjct: 540 FR 541