Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  223 bits (568), Expect = 2e-62
 Identities = 127/339 (37%), Positives = 205/339 (60%)

Query: 178 LMLVLTILMAYQFTRRLETLSQEARKVFDNPLMELVYNGRVDDLSEIQLAMKMRQSELNA 237
           L ++  +++  Q TR L        ++    L + +   R D+L  +Q  ++   + L  
Sbjct: 301 LGIIAAVIITRQITRPLRETLAVVDRIASGDLTQTLAVTRSDELGVLQQGIQRMGTTLRE 360

Query: 238 VVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEIAHNAQA 297
           ++G I+DS +QI  AA+  S  +  T+  +++Q  ET+Q+ATA+ +M+ T  E+A NA+ 
Sbjct: 361 LIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMSATVAEVARNAEQ 420

Query: 298 ASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQVMEVIQSI 357
           AS A  +A   ARDG   V + +  I  +A+++  +   + +L  +S  IG+VM+VI+++
Sbjct: 421 ASQAASNADREARDGDKVVGEAIAQIERLANEVGRSVDAMTELEQESDKIGKVMDVIKAV 480

Query: 358 AEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSIQTSTRNA 417
           AEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LAQR+ +ST EI+ ++ ++Q+ TR  
Sbjct: 481 AEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTVEIETLVAALQSGTRQV 540

Query: 418 VETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTEDMNRSV 477
              +    +L+VS V  +  +G  L ++   VS I   N+QIA A EE + V E+++RS+
Sbjct: 541 SSIMLNSRELTVSSVTLSRQAGTSLGSITQTVSSIQAMNQQIAAAAEEQSAVAEEISRSI 600

Query: 478 QSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFR 516
            ++ DVS +T   +E T     +LA    Q  ++V++FR
Sbjct: 601 VNVRDVSEQTASASEETAASSVELARLGGQLQTMVSRFR 639