Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  228 bits (581), Expect = 5e-64
 Identities = 138/346 (39%), Positives = 203/346 (58%), Gaps = 4/346 (1%)

Query: 174 AGLPLMLVLTILMAYQFTRRLETLSQEARKVFDN----PLMELVYNGRVDDLSEIQLAMK 229
           A   L +VL IL A+  TR++ T  QE  +V +      L   +   R D+L ++Q  ++
Sbjct: 291 AATALAMVLGILAAWVITRQITTPLQETLEVVERVASGDLSRNLNVDRKDELGKLQATIQ 350

Query: 230 MRQSELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITAT 289
                L  +VG I+D   QI  AA+  S  +  T+  +++Q  ET+Q+ATA+ +M  T  
Sbjct: 351 RMTVSLRELVGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMTATVQ 410

Query: 290 EIAHNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQ 349
           E+A NA+ AS+A V A   ARDG   V + +  I  +AS +  +S  +  L  +S  IG 
Sbjct: 411 EVARNAEEASEAAVAADRQARDGERVVNEAIAQIERLASAVGNSSEAMGALKQESDKIGS 470

Query: 350 VMEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITS 409
           V++VI+S+AEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LAQR+ +ST+EI+ +I  
Sbjct: 471 VLDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEALIAR 530

Query: 410 IQTSTRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANV 469
           +Q+ T+ A   ++   +LS S V+    +G  L  +   VS I   N+QIA A EE +  
Sbjct: 531 LQSGTQQATTVMDSSRELSTSSVELTRRAGGSLANITKTVSSIQAMNQQIAAAAEEQSAT 590

Query: 470 TEDMNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQF 515
            E++NRS+ ++ DVS +T   +E T     +LA        LV++F
Sbjct: 591 AEEINRSIINVRDVSEQTSAASEETAASSVELARLGNHLQVLVSRF 636