Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  200 bits (508), Expect = 1e-55
 Identities = 113/298 (37%), Positives = 174/298 (58%)

Query: 219 DDLSEIQLAMKMRQSELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLA 278
           D+++EI            A++ ++ D+   + E+ +  S N+   +D +  Q  ET+ +A
Sbjct: 322 DEIAEIGQHFNEMVESFRALIQQVNDAVNVMNESCQELSANATQASDGVLRQLNETDMVA 381

Query: 279 TAITQMNITATEIAHNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIE 338
           TAIT+M  T  EIA N + A++   H    A+ G  +VEQT++ I  +A Q+  ++SV+ 
Sbjct: 382 TAITEMGATIDEIAKNTELAAERANHTHTNAQVGQQSVEQTIEKIQSLAQQLNNSASVVA 441

Query: 339 QLSSQSAMIGQVMEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTE 398
           +L   S  IG V++VI+ IAEQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA R+ E
Sbjct: 442 ELERDSGTIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQE 501

Query: 399 STKEIQEVITSIQTSTRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQ 458
           ST+EI  +I ++Q+ TR+ V+ +E   +      + A  +G  L  +   V++I   + Q
Sbjct: 502 STEEIAGIIQTLQSRTRSIVQLMEASQRQGGESAEQAASAGTMLAQINQDVTNIMDMSTQ 561

Query: 459 IATAIEEMANVTEDMNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFR 516
           IA AIEE ++V  ++N++V  I D++ E+   A         +          V+QFR
Sbjct: 562 IAAAIEEQSSVAAEVNKNVVVIRDIAEESSHAAMANAKASDDVRERAEYLQRAVSQFR 619