Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  206 bits (525), Expect = 1e-57
 Identities = 119/303 (39%), Positives = 191/303 (63%), Gaps = 8/303 (2%)

Query: 217 RVDDLSEIQLAMKMRQSELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQ 276
           R D+L  I   +    + L  ++  I +++  +G++A   ++ +    D +  Q  ETEQ
Sbjct: 241 RDDELGHIAKDLNGVVNHLKGILKNIAEAASTLGDSADELNEFTRQANDRMFKQQSETEQ 300

Query: 277 LATAITQMNITATEIAHNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSV 336
            ATA+ +M     E+A ++ +A+++  +A  +A  G   V+Q++ ++  +ASQ++  ++V
Sbjct: 301 TATAMNEMTAAVAEVAQSSNSAAESARNADESAARGNSIVQQSISSMSVLASQIQGTAAV 360

Query: 337 IEQLSSQSAMIGQVMEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRS 396
           I +L+++S  IG+V++VI+SIAEQTNLLALNAAIEAARAG+QGRGFAVVADEVR LAQR+
Sbjct: 361 IGELATESQNIGRVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRT 420

Query: 397 TESTKEIQEVITSIQTSTRNAVETIEQGNKLSVSCVDNAHLS----GDKLTALLSQVSDI 452
           +EST+EI+ +I S+Q   ++AV ++EQG    ++ VDNA+ S    G  L  +++ V  I
Sbjct: 421 SESTREIESMIESLQQGVKSAVNSMEQG----IAQVDNANESTNAAGSALQDIVASVDSI 476

Query: 453 TMRNEQIATAIEEMANVTEDMNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLV 512
           T  N  IATA +E + V E +N+S+ +ISD++ E+   A +      QLA       + V
Sbjct: 477 TQLNTHIATAADEQSCVAESINQSIIAISDIAQESTQAANDLSEAVHQLAQLAGHMRTQV 536

Query: 513 AQF 515
             F
Sbjct: 537 GTF 539