Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25-INTG

 Score =  206 bits (524), Expect = 2e-57
 Identities = 128/347 (36%), Positives = 202/347 (58%), Gaps = 4/347 (1%)

Query: 174 AGLPLMLVLTILMAYQFTRRLET-LSQEARKVFDNPLMELVYNGRV---DDLSEIQLAMK 229
           A L +  +LTI++A  FT  + + +S   +   D    +L ++  V   D+ S +  A+ 
Sbjct: 194 AVLIVAFILTIVLAVLFTNSIVSPISSSLKLAEDIAAGDLTHDLEVTGSDEASRLMHALN 253

Query: 230 MRQSELNAVVGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITAT 289
           + Q  L   +  I  +S Q+  AA   +  + +    L  Q  E EQ ATA+T+M+    
Sbjct: 254 LMQKNLRHTILEISGASSQLSTAAVEMTSITESADRTLQQQNSEIEQAATAVTEMSAAVE 313

Query: 290 EIAHNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQ 349
           E+A NA + S+A + +  AA  G   V +T+ A+  +   ++ +S  +++L++Q+  I +
Sbjct: 314 EVARNANSTSEAAMQSSIAADLGNQKVTETLTAMRGLTGLVEVSSDQVKELAAQAQDISK 373

Query: 350 VMEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITS 409
           V+ VI++IAEQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA R+  ST+EI+++I++
Sbjct: 374 VLSVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQTSTQEIEQMIST 433

Query: 410 IQTSTRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANV 469
           IQT +  AVE++++      S  D A  +G  L  ++  V +I  RN QIATA EE A+V
Sbjct: 434 IQTGSSAAVESMQKSTSEVYSTRDTAEHAGQSLRQIIDSVLEINDRNIQIATASEEQAHV 493

Query: 470 TEDMNRSVQSISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFR 516
             D++RS+ SI D++ ++      T     +L+        LV +FR
Sbjct: 494 ARDVDRSLISIRDLAVQSSEGTRQTLTASNELSRLAVNLNDLVLRFR 540