Pairwise Alignments

Query, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 522 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  303 bits (776), Expect = 1e-86
 Identities = 173/510 (33%), Positives = 275/510 (53%), Gaps = 11/510 (2%)

Query: 10  KEVTYPPHFNLLSTTTLSSHIKYASKEFCDVAGYTLDELVNQPHNMVRHPDMPPEAFKDM 69
           +EV   P   L+STT     I Y ++ F +V+GY  +EL+ QPHN VRHPDMP  AFK+M
Sbjct: 19  QEVRLTPQDELISTTDTRGIITYVNQRFAEVSGYKAEELIGQPHNKVRHPDMPSAAFKEM 78

Query: 70  WEHLKAGKSWMGMVKNRCKNGDHYWVDAFASPIKENGKVVEYQSVRLCPSRQHVDNADKL 129
           WE LK+G+SW G+VKNRCKNG  YWVDAF SP+ ENG ++ YQSVR+ P   +V  A  +
Sbjct: 79  WEKLKSGQSWRGIVKNRCKNGGFYWVDAFVSPLFENGTIIGYQSVRIQPQAAYVSKATDI 138

Query: 130 YKEIKAGKTPWQLKMPRTRLWQRLGLGFIVAAGVSFAADRFFAGAGL----PLMLVLTIL 185
           Y+ +   K    +  P + + +R     +   G+  A   +F G G+     +++ L + 
Sbjct: 139 YRRLVQNKP---IPKPLSLMQKRFVSAVVATTGLLIAG--YFWGWGVIFAGAILMSLNLA 193

Query: 186 MAYQFTRRLETLSQEARKVFDNPLMELVYNGRVDDLSEIQLAMKMRQSELNAVVGRIQDS 245
           + Y    R+     E ++ +D+ +   +Y+G  D  S +   + + Q+++N V+GR QD 
Sbjct: 194 IFYDEAFRIPAKLVEMQEKYDS-ISRYIYSG-ADTSSILDFQLILLQAKMNGVLGRTQDQ 251

Query: 246 SIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEIAHNAQAASDATVHA 305
           +  +   A      +  T  +LD +  + EQLA+A+ +M+ T  E+A N Q  S +   A
Sbjct: 252 AHHLHAIADQLVVTTEQTYVSLDQEKNQLEQLASAMEEMSSTIAEVAQNTQLTSTSINTA 311

Query: 306 KNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQVMEVIQSIAEQTNLLA 365
            +        ++     + ++A  +  A++   QL+ ++  +   M  I SIAEQTNLLA
Sbjct: 312 YDLCLKSSANMKANTQKVEQLAKSVADAANNAHQLNKEAERVASAMGEIDSIAEQTNLLA 371

Query: 366 LNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSIQTSTRNAVETIEQGN 425
           LNAAIEAARAG+QGRGFAVVADEVR L+ R+  ST  I + +  + +      + +EQ  
Sbjct: 372 LNAAIEAARAGEQGRGFAVVADEVRALSSRTQLSTNSISQSVDKMFSMLNAWAKEMEQSR 431

Query: 426 KLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTEDMNRSVQSISDVST 485
           + +  C ++   S + +  +  +VS+I    +Q A A ++   V  ++  ++ SI+  S+
Sbjct: 432 QHAELCANDIQTSAENVNTIYQEVSEIHTFAQQNAVAADQQRQVVHEITNNIHSITQTSS 491

Query: 486 ETLGLAENTQNECRQLAHNLAQQTSLVAQF 515
           E L       +    L HN  +   L   F
Sbjct: 492 ENLAATHQIGDAANHLKHNAEKALGLRRAF 521