Pairwise Alignments

Query, 959 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 960 a.a., 4Fe-4S ferredoxin (NCBI) from Rhodospirillum rubrum S1H

 Score =  960 bits (2481), Expect = 0.0
 Identities = 506/959 (52%), Positives = 654/959 (68%), Gaps = 12/959 (1%)

Query: 1   MTPPIADSL-YLQLEQILASRIDPQRIITQEAKRLAYGTDASFYRLIPKIVLRLKSLDEV 59
           MT   A S+ Y  +   L + +  +RI T   + LAYGTDASFYRL+PK+V+ +    EV
Sbjct: 1   MTDHPASSIDYSAVLAALRALLPNERIFTDPLRLLAYGTDASFYRLLPKVVVEVADEAEV 60

Query: 60  IFAIQSCGQLGIHFTFRAAGTSLSGQAVSDSVLITLTDDWRGHEVQNQGLKIRLQPGVIG 119
              +  C Q     TFRAAGTSLSGQAVS+SVL+ L   W G  ++ +G +IRLQPGVIG
Sbjct: 61  ARVLAICRQYRAPVTFRAAGTSLSGQAVSESVLMVLGRGWTGAVIEAKGARIRLQPGVIG 120

Query: 120 ADANKYLAPFQRKIGPDPASINTCKIGGIAANNASGMCCGTAQNSYRTVDGMQIVFADGY 179
           A+AN+ LA F RKIGPDPASI+TCKIGGIAANNASGMCCGT+ NSY+TV+ M+++ ADG 
Sbjct: 121 AEANRKLAGFGRKIGPDPASIDTCKIGGIAANNASGMCCGTSDNSYQTVEAMRLILADGT 180

Query: 180 VLDTRDPDSVARFKQERADLVEGIHALCQETLANSELTERIRHKYRLKNTTGYALNALVD 239
           ++DT D  S+ARF+Q  ADL+ G+ AL +   AN+ L  RIR KY +KNTTGY+LNALVD
Sbjct: 181 LVDTADARSIARFRQTHADLLAGLAALGRRVRANAALAARIRRKYAIKNTTGYSLNALVD 240

Query: 240 FSDPIEVLTHLMIGSEGTLGFIADITYHTVIEHAHKASALLVFADIEQASQAVTTLSKTP 299
           + DP+++LTHL+IGSEGTLGFIA+ITY T+ EH  KASALL+FADI +A +AVT L  TP
Sbjct: 241 YDDPLDILTHLLIGSEGTLGFIAEITYRTIAEHPAKASALLLFADIAEACRAVTLLKATP 300

Query: 300 VAAVEMMDGRALRSVADKKGMPEFIAKLDLEAAALLIESHASDAQTLHAQCEQVMSALQR 359
           V+AVE+MD  ALRSV DK GMP  I  L    AALL+E+ A+D+  L A  E++   L  
Sbjct: 301 VSAVELMDRAALRSVEDKPGMPAQIRGLAPGVAALLVETRAADSLALQANIEEIGQTLGA 360

Query: 360 YHIIESVPFTSESKTVATLWGIRKGMFPAVGAVREVGTTVIIEDVAFPVEKLAAGVRDLQ 419
              +    F+S+     TLW IRKG+FPAVGAVR  GTTVIIEDVAFP+E LAA    L+
Sbjct: 361 VTPLFPPAFSSDPAVYGTLWKIRKGLFPAVGAVRATGTTVIIEDVAFPIEHLAAATVALE 420

Query: 420 ALFDKYHYNEAIIFGHALEGNLHFVFTQGFDKQSEIERYGAFMDDVAELVAVKYQGSLKA 479
            L  ++ Y+EAI+FGHAL+GNLHFVFTQ F  Q+EI+RY AFMD V E+V   Y GSLKA
Sbjct: 421 RLCHEHGYHEAILFGHALDGNLHFVFTQDFGSQAEIDRYAAFMDAVGEMVVKTYDGSLKA 480

Query: 480 EHGTGRNMAPYVELEWGKEGYALMQKIKALFDPNRLLNPGVIINEDKHSHISNLKPMPAA 539
           EHGTGRNMAP+VE+EWG E Y LM +IKAL DP  LLNPGVI+N D  +H+ NLKP+PAA
Sbjct: 481 EHGTGRNMAPFVEMEWGSEAYGLMGEIKALLDPLGLLNPGVILNGDPRAHLKNLKPLPAA 540

Query: 540 DNLVDRCIECGFCEPVCPSRTLTLSPRQRIVLYRELQRRRAAGENVASSELEQVFEYQGL 599
           D L+D+CIECGFCEP+CPS  LTLSPRQRI  +RE+ R  +AG +   + L  +++YQG+
Sbjct: 541 DALIDKCIECGFCEPLCPSLFLTLSPRQRITAWREIARLESAGASADKAALRDLYDYQGV 600

Query: 600 DTCAATGLCAERCPVGINTGDLVKKLR-IAKYQKFTPIARWTAEHFSATTTLARGGLKAN 658
           DTCAA GLC   CPVGINTG L  ++R   +      I RW   HF+AT+ L R GL + 
Sbjct: 601 DTCAACGLCGTVCPVGINTGALTTQIRGTRRGPTGRRIGRWLGRHFAATSALTRLGLGSA 660

Query: 659 QLATQVLGEKSVDSMVNGLRRISKGKTPLWMPEMPQANTHSLELAVENLPRSDK-KVVYL 717
            L  + +GE  +++    LRR++  + P W   MP+A T +    +E    S K +VVY 
Sbjct: 661 ALIGRTIGEGRLETASATLRRLTGNRLPRWHRAMPKA-TPTPTPPLETANNSQKPRVVYF 719

Query: 718 PSCASRNMGQQASATDQRPLTEVTLSLLNKAGFEVILPAELSSQCCGMPYDSKGMTEIAQ 777
           P CA R MG   +     PL   T +LL +AGFEVI P  L + CCG+P++S G+ ++A 
Sbjct: 720 PGCAGRAMGPATNDPTALPLPARTEALLRRAGFEVIYPEGLDNLCCGVPFESAGLADVAA 779

Query: 778 SKAQQLEHALWQASQEGRYPILMDTSPCA---KRSIEQFTKPMEILEPTGLVSRYLLDHL 834
           +K  ++  AL  AS +G  PI+ DTSPC+   K+ +E+  +P + +E    +  ++L HL
Sbjct: 780 AKTAEVAAALRIASADGTIPIISDTSPCSLRLKQHLEERLRPQDAVE---FLHDHVLGHL 836

Query: 835 TLAPKQETIMLHITCSSRRLGLEGDMLKLAKACASEVIVPEHIQCCGWAGDKGFTTPELN 894
            L P    + +HITCS++R+GL G M  LA ACA  VI P  I CCG+AGD+GF  PELN
Sbjct: 837 PLRPTPGPVAIHITCSTQRMGLGGKMEALAAACAETVIRPPGIPCCGFAGDRGFVQPELN 896

Query: 895 AAAVHSLKEQVPAHCSRGFSNSRTCEIGLSHHSGIPYQSILYLVDEVARPRLATQESTE 953
           A A+  LK  +P  C+ G+S++RTCEIGLS  +G PY+SI+ LV   +R   A Q+  E
Sbjct: 897 AHALRDLKASLPEGCAEGYSSNRTCEIGLSQQAGFPYRSIIDLV--ASRVEAADQQDQE 953