Pairwise Alignments

Query, 959 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 1026 a.a., FAD linked oxidase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  125 bits (315), Expect = 1e-32
 Identities = 232/1047 (22%), Positives = 398/1047 (38%), Gaps = 144/1047 (13%)

Query: 7    DSLYLQLEQILASRIDPQRIITQEAKRLAYGTDASFYRLIPKIVLRLKSLDEV--IFAIQ 64
            + +YL     LA       I  + + RLA  TD S Y+ +P+ VL  K+  +V  I  + 
Sbjct: 12   EPVYLAFLDALAQSNYCGDIDKRYSARLAQATDNSVYQFLPQAVLYPKTQADVKLIMTLA 71

Query: 65   SCGQLG-IHFTFRAAGTSLSGQAVSDSVLITLTDDWRGH-EVQNQGLKIRLQPGVIGADA 122
            +  +   + F+ R  GT  +GQ+++  +++ L+  +    E+  +   +R+Q GV+    
Sbjct: 72   TKPEFKQVVFSARGGGTGTNGQSLTHGLILDLSRYFNQVIEINEKERWVRVQAGVVKDAL 131

Query: 123  NKYLAPFQRKIGPDPASINTCKIGGIAANNASGMCCGTAQNSYRTVDGMQIVFADGYVLD 182
            N  L P      PD ++ N   +GG+   +ASG        +   V  +  V  DG VL+
Sbjct: 132  NDALRPHGFFFSPDLSTSNRATMGGMINTDASGAGSLVYGKTSDHVLELISVLYDGSVLE 191

Query: 183  TRDPDSVARFKQERADLVEG--IHALCQETLANSELTERIRHKYRLKNT----TGYALNA 236
            T+  D  A    E  D +E   +    Q  +A      R   + R        TGY L  
Sbjct: 192  TKPLDLKAL---EALDALESPSLGQSLQRDIARMTREHRGEVESRFPKLNRFLTGYDLKN 248

Query: 237  LVDFSDPIEVLTHLMIGSEGTLGFIADITYHTVIEHAHKASALLVFADIEQASQAVTTLS 296
            + + +     L+ ++ GSEGTL  I +           +    + +   + A +    L 
Sbjct: 249  VWNETVDEFNLSRILTGSEGTLAVITEAKLDITPLPKTRMMVNIKYDSFQSALRHAPDLV 308

Query: 297  KTPVAAVEMMDGRALRSVADKKGMPEFIAKL--DLEAAA---LLIESHASDAQTLHAQCE 351
            K  V  VE +D + L ++A +  +   ++ L  D+  A+   L +   A +   + A+ +
Sbjct: 309  KAEVTVVETVDSKVL-NLAKQDIIWHSVSSLIEDVPGASIDGLNMVEFAGEPDEVEAKVK 367

Query: 352  QVMSALQRYHIIESVPF-----TSESKTVATLWGIRKGMFPAVGAVREVGTTVII-EDVA 405
            Q+ + L                TS+  ++ T++ +RK     +GA +     +   ED A
Sbjct: 368  QLEAMLDTQLAANEAGLLGYQVTSDKASINTIYAMRKKAVGLLGATKGSRKPIAFAEDTA 427

Query: 406  FPVEKLAAGVRDLQALFDKYHYNEAIIFGHALEGNLHFVFTQGFDKQSEIERYGAFMDDV 465
             P EKLA  + + +AL D +     + FGH   G LH           +        D V
Sbjct: 428  VPPEKLADFILEFRALLDSHELQYGM-FGHVDAGVLHVRPALDMCDPQDERLLKTVSDQV 486

Query: 466  AELVAVKYQGSLKAEHGTGRNMAPYVELEWGKEGYALMQKIKALFDPNRLLNPGVI---- 521
            A L  +KY G +  EHG G     Y    +G+  + L++++K  FDPN  LNPG +    
Sbjct: 487  AALT-LKYGGLMWGEHGKGVR-GEYGPSVFGETLFGLLEEVKGYFDPNNKLNPGKLVAPK 544

Query: 522  --------INEDKHSHISNLKPMPAADNLVD--RCIECGFC------EPVCPSRTLT--- 562
                    ++  K        P+   +   D   C   G C       P+CPS  +T   
Sbjct: 545  GSGPLLYNVDSTKRGAFDRQIPVNTREAFPDVMNCNGNGLCFNYSVYSPMCPSFKVTGDR 604

Query: 563  -LSPRQRIVLYRE-LQRRRAAG------------------ENVASSELEQVFEYQGLDT- 601
              SP+ R  L RE L+   A G                  +N    E E  + ++ +++ 
Sbjct: 605  VQSPKGRAGLMREWLRLLEAEGVDVEALAKAKPLGWLQRTQNTLKKEREYDYSHEVMESL 664

Query: 602  --CAATGLCAERCPVGINTGDLVKKLRIAKYQKF-TPIARWTAEHFSATTTLARGGLKAN 658
              C A   C+ +CPV ++      +     YQ++  P+  +       +  L     +  
Sbjct: 665  KGCLACKACSSQCPVKVDVPKFRAQFFNIYYQRYLRPVKDYLVAGIEESLPLMAKVPQIT 724

Query: 659  QLATQVLGEKSVDSMVNGLRRISKGKTPLWMPEMPQANTHSLEL-AVENLPRSDKKVVYL 717
              A+Q    + V     G         P     +        +L A++ +P +++    L
Sbjct: 725  NFASQNKLSQWVIKQSIGYVDAPALSVPTLKQRLENHACRGYDLNALQQIPEAERDQYVL 784

Query: 718  PSCASRNMGQQASATDQRPLTEVTLSLLNKAGFEVILPAELSSQCCGMPYDSKG----MT 773
                  N   +A            + L+ K GF+ +L   L  +  G P   KG      
Sbjct: 785  VVQDPFNSFYEAETVYH------FIKLIEKLGFKPVL---LPFKPNGKPIHIKGFLDKFA 835

Query: 774  EIAQSKAQQLE--HALWQ---------------------ASQEGRYPILMDTSPCAKRSI 810
            + AQS A  L   HAL                       A   G + +L+        + 
Sbjct: 836  KTAQSSADFLNQVHALGMPMVGVDPAMVLCYRDEYKEILAENRGDFNVLL--------AN 887

Query: 811  EQFTKPMEILEPTGLVSRYLLD-HLTLAPKQETIMLHITCSSRRLGLEGDMLKLAKACAS 869
            E   K ++I+ PT   ++     + T A +Q T   H T S+ +     +   +  A  +
Sbjct: 888  EWLLKVIDIVAPTAKSAKLNKSANATNANRQFTWFSHCTESTAKPNTAKEWQAIFSAFGA 947

Query: 870  EVIVPEHIQCCGWAGDKGFTTPELNAA----------AVHSL-KEQVPAHCSRGFSNSRT 918
            E+     + CCG AG  G  +  L  +          A+ SL  EQ+         +  +
Sbjct: 948  ELSTVS-LGCCGMAGTYGHESDNLKRSKALYEMSWEKAIDSLPHEQI-------LISGYS 999

Query: 919  CEIGLSHHSGI----PYQSILYLVDEV 941
            C   +    G     P Q++L L+D V
Sbjct: 1000 CRSQVKRFGGFKPKHPVQALLSLIDNV 1026