Pairwise Alignments

Query, 959 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 1013 a.a., oxidoreductase, FAD-binding, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  141 bits (356), Expect = 2e-37
 Identities = 163/676 (24%), Positives = 284/676 (42%), Gaps = 90/676 (13%)

Query: 33  RLAYGTDASFYRLIPKIVLRLKSLDEVIFAIQSCGQ---LGIHFTFRAAGTSLSGQAVSD 89
           RL   TD S Y+ +P+ VL  K   ++  A++   +   +G+ F+ R  GT  +GQ+++ 
Sbjct: 38  RLVQATDNSVYQFLPQAVLYPKHQKDIEIALKLAAKAEFVGVTFSARGGGTGTNGQSLTH 97

Query: 90  SVLITLTDDW-RGHEVQNQGLKIRLQPGVIGADANKYLAPFQRKIGPDPASINTCKIGGI 148
            +++ ++    R  EV  +   +R++ GVI    N  L P      PD ++ N   IGG+
Sbjct: 98  GLILDVSRYMNRVLEVNPEQGWVRVEAGVIKDALNDALRPHGFFFSPDLSTSNRATIGGM 157

Query: 149 AANNASGMCCGTAQNSYRTVDGMQIVFADGYVLDTR--------DPDSVARFKQERADLV 200
              +ASG        +   V  ++ V  DG VLDTR        DPD+V+     +  L+
Sbjct: 158 INTDASGAGSLVYGKTSDHVLALRSVLIDGSVLDTRPLDAGVLGDPDNVSDNPLGQK-LI 216

Query: 201 EGIHALCQETLANSELTERIRHKYRLKNT--TGYALNALVDFSDPIEVLTHLMIGSEGTL 258
             I  +C++        E+I  ++   N   TGY L  + +       L+ ++ GSEGTL
Sbjct: 217 SSIAQVCRDK------REQIEKQFPKLNRFLTGYDLKHVWNAGLTQFDLSRILTGSEGTL 270

Query: 259 GFIADITYHTVIEHAHKASALLVFADIEQASQAVTTLSKTPVAAVEMMDGRALRSVADKK 318
             I +   +     + +A   + +   + A +   +L       VE +D + L ++A + 
Sbjct: 271 AVITEAKLNITPLPSERAMVNIKYDSFQSALRHAPSLVAARATVVETVDSKVL-NLARED 329

Query: 319 GMPEFIAKLDLEAAALLIES-----HASDAQTLHAQCEQVMSALQRYHI---------IE 364
            +   ++ L  E     I+       A D     A+ EQ +++L+             + 
Sbjct: 330 IVWHSVSDLIQEVPGKTIDGLNMVEFAGDT----AEVEQKLASLEAVLTEQISRGECGVV 385

Query: 365 SVPFTSESKTVATLWGIRKGMFPAVGAVREVGTTVII-EDVAFPVEKLAAGVRDLQALFD 423
               T +  ++  ++G+RK     +GA +     +   ED A P EKLA  + + +AL D
Sbjct: 386 GYQVTQDKASIEKIYGMRKKAVGLLGATKGRRKPIAFAEDTAVPPEKLADYIMEFRALLD 445

Query: 424 KYHYNEAIIFGHALEGNLHFVFTQGFDKQSEIERYGAFMDDVAELVAVKYQGSLKAEHGT 483
            ++    + FGH   G LH           + +      D VA L  +KY G +  EHG 
Sbjct: 446 SHNLQYGM-FGHVDAGVLHVRPALDMCDVEDEKLLRVISDQVAALT-LKYGGLMWGEHGK 503

Query: 484 GRNMAPYVELEWGKEGYALMQKIKALFDPNRLLNPGVI------------INEDKHSHIS 531
           G     Y    +G E Y ++Q+IK LFDP+  LNPG +            ++  K     
Sbjct: 504 GVR-GQYGPAVFGDELYGVLQEIKGLFDPDNRLNPGKLVAPKQVGSLAFDVDSTKRGQFD 562

Query: 532 NLKPMPAADNLVD--RCIECGFC------EPVCPSRTLT----LSPRQRIVLYRE----- 574
              P+   D   D   C   G C       P+CPS  +T     SP+ R  L RE     
Sbjct: 563 RQIPVAVRDAFPDVMNCNGNGLCFNYSSYSPMCPSFKVTGDRVQSPKGRAGLMREWLRLL 622

Query: 575 ---------LQRRRAAG-----ENVASSELEQVFEYQGLDT---CAATGLCAERCPVGIN 617
                    L + +  G     +N  +++ +  + ++ +++   C A   C+ +CPV ++
Sbjct: 623 ESEGVDVNALAKAKPLGILQRMQNTINAKRDYDYSHEVMESLKGCLACKACSSQCPVKVD 682

Query: 618 TGDLVKKLRIAKYQKF 633
                 +     YQ++
Sbjct: 683 VPKFRAQFFNIYYQRY 698