Pairwise Alignments

Query, 959 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 914 a.a., iron-sulfur cluster-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  768 bits (1984), Expect = 0.0
 Identities = 393/921 (42%), Positives = 578/921 (62%), Gaps = 22/921 (2%)

Query: 32  KRLAYGTDASFYRLIPKIVLRLKSLDEVIFAIQSCGQLGIHFTFRAAGTSLSGQAVSDSV 91
           +R A+ TDAS++R++P++V+  ++L++V   +    +     TFRAAGTSLSGQA+ + +
Sbjct: 7   RRFAWSTDASYFRIVPEVVVHAETLEQVKLTLTVARKHNAPVTFRAAGTSLSGQAIGEGI 66

Query: 92  LITLTDD-WRGHEVQNQGLKIRLQPGVIGADANKYLAPFQRKIGPDPASINTCKIGGIAA 150
           L+ L  D +R  EV +   +I L   VIG+DAN  LAP  RKIGPDPA+I + KIGGI A
Sbjct: 67  LLILGHDGFRKIEVSSDAKQITLGAAVIGSDANAVLAPLNRKIGPDPATIASAKIGGIVA 126

Query: 151 NNASGMCCGTAQNSYRTVDGMQIVFADGYVLDTRDPDSVARFKQERADLVEGIHALCQET 210
           NNASGMCCGTAQNSY+T+   +++FADG  LDT    S A F +    L++ +  L   T
Sbjct: 127 NNASGMCCGTAQNSYQTIASAKLLFADGTELDTGCEKSKAEFAKTHGKLLQDLSELSHLT 186

Query: 211 LANSELTERIRHKYRLKNTTGYALNALVDFSDPIEVLTHLMIGSEGTLGFIADITYHTVI 270
             NS L ERIR KY +KNTTGY +N+L+DF+DP +++ HLM+G EGTL FI ++TYHTV 
Sbjct: 187 RHNSALAERIRKKYSIKNTTGYGINSLIDFTDPFDIINHLMVGMEGTLAFINEVTYHTVN 246

Query: 271 EHAHKASALLVFADIEQASQAVTTLSKTPVAAVEMMDGRALRSVADKKGMPEFIAKLDLE 330
           E   KASA+ VF ++E A++A+  ++   V+A E++D  ++++V  K GMP+++++L   
Sbjct: 247 EAKFKASAMAVFHNMEDAARAIPLINGESVSAAELLDWPSIKAVTGKPGMPDWLSELPAL 306

Query: 331 AAALLIESHASDAQTLHAQCEQVMSALQRYHIIESVPFTSESKTVATLWGIRKGMFPAVG 390
           +A LLIES A DAQTL    + V + L  +  I  + F++        W +RKG+FP VG
Sbjct: 307 SAILLIESRADDAQTLEHYTQDVTAKLAGFDFIRPMEFSTNPAVYDKYWAMRKGLFPIVG 366

Query: 391 AVREVGTTVIIEDVAFPVEKLAAGVRDLQALFDKYHYNEAIIFGHALEGNLHFVFTQGFD 450
             R  GT+VIIEDVAF +E LAA   D+  LF K+ Y E  I+GHAL GN HF+ T  F 
Sbjct: 367 GERPKGTSVIIEDVAFELEHLAAAAHDITELFHKHGYPEGCIYGHALAGNFHFIITPAFT 426

Query: 451 KQSEIERYGAFMDDVAELVAVKYQGSLKAEHGTGRNMAPYVELEWGKEGYALMQKIKALF 510
            Q++I+R+ AFMDD+A++V  KY GS+KAEHGTGR +AP+VE EWG++ Y LM+ IK +F
Sbjct: 427 TQADIDRFHAFMDDIADMVINKYNGSMKAEHGTGRAVAPFVEKEWGQDAYTLMKNIKQVF 486

Query: 511 DPNRLLNPGVIINEDKHSHISNLKPMPAADNLVDRCIECGFCEPVCPSRTLTLSPRQRIV 570
           DP  +LNPGVI+N+D + H+ N+KP P  D+ VD+CIECGFCE  CP+  L  SPRQRI 
Sbjct: 487 DPQGILNPGVILNDDSNIHVKNIKPCPVVDDFVDKCIECGFCEKTCPTSALNFSPRQRIA 546

Query: 571 LYRELQRRRAAGENVASSELEQVFEYQGLDTCAATGLCAERCPVGINTGDLVKKLRIAKY 630
             RE++R   +G+  A++++    +Y  +DTCAA  LC   CPV  + G LV+KLR   Y
Sbjct: 547 TLREIERLEQSGDKAAAAKMRADAKYDVIDTCAACQLCTIACPVDNSMGQLVRKLR-TPY 605

Query: 631 QKFT--PIARWTAEHFSATTTLARGGLKANQLATQVLGEKSVDSMVNGLRRISKGKTPLW 688
              T   +  + A+HF A   +   G     +  ++ G+   ++++   R ISK + P W
Sbjct: 606 ISTTEQKVLDFQAKHFGAVNQVISTGFDVLGVIHKITGDGITNALMKTGRLISK-EVPYW 664

Query: 689 MPEMPQANTHSLELAVENLPR------SDKKVVYLPSCASRNMGQQASATDQRPLTEVTL 742
            P+ P+            LP+        + VVY P+C  R  G      D R L EV +
Sbjct: 665 NPDFPKGG---------KLPKPSPAKAGQETVVYFPACGGRTFGPTPKDPDNRTLPEVVV 715

Query: 743 SLLNKAGFEVILPAELSSQCCGMPYDSKGMTEIAQSKAQQLEHALWQASQEGRYPILMDT 802
           +LL +AG+ VI P +    CCG  ++SKG  + A +K Q+L   L + S  G+ P+L+D 
Sbjct: 716 TLLERAGYNVITPEKTRDLCCGQMWESKGDFKNADAKRQELIDVLSKMSNGGKIPVLVDA 775

Query: 803 SPCAKRSIEQFTKPMEILEPTGLVSRYLLDHLTLAPKQETIMLHITCSSRRLGLEGDMLK 862
             C  R++      ++I +    +   LLD L++  K+  + LH+ CS+R++ LE  M  
Sbjct: 776 LSCTYRTLTG-NPQVQITDLVEFMHDKLLDKLSI-NKKVNVALHLGCSARKMKLEPKMQA 833

Query: 863 LAKACASEVIVPEHIQCCGWAGDKGFTTPELNAAAVHSLKEQVPAHCSRGFSNSRTCEIG 922
           +A AC+++V+ P  I+CCG+AG+KG   PE+NA+A+ ++K+ +P     G+  +R CE+G
Sbjct: 834 IANACSAQVLKPAGIECCGYAGEKGLYKPEINASALRNIKKLIPVEVKEGYYANRMCEVG 893

Query: 923 LSHHSGIPYQSILYLVDEVAR 943
           L+ HSGI Y+ + YL++E +R
Sbjct: 894 LTQHSGISYRHLAYLLEECSR 914