Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., LysR-family transcriptional regulator clustered with PA0057 from Pseudomonas fluorescens FW300-N2E2

 Score =  179 bits (454), Expect = 7e-50
 Identities = 101/285 (35%), Positives = 164/285 (57%), Gaps = 2/285 (0%)

Query: 8   LFYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAGKALLHG 67
           +F  V++LGS S  AE   L+  VVS+ LA LE+ +G +L++RTTRKL+LT AG  +L  
Sbjct: 3   VFVTVVDLGSQSAAAEHLDLSRPVVSRYLAELEDWVGARLMHRTTRKLSLTAAGSEILPR 62

Query: 68  AKNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLTVDMSLD 127
            + + + + E   AV    +   G +++S  T  G   LA A+AE+   +PG++VD+ + 
Sbjct: 63  CRQMLELSGEMQAAVSTPDDAPRGMLRISASTSFGQAQLASAMAEYVKRYPGVSVDLQML 122

Query: 128 NRFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPEDLARHN 187
           +R V+LV+   DL IR     D +LIAR +   + V+CASP Y+  +  PL+ EDL+RHN
Sbjct: 123 DRTVNLVDERIDLAIRMSNDLDPNLIARRLTVCRSVICASPQYLREHSTPLRVEDLSRHN 182

Query: 188 CLQYAYQTTGATDWEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPRCLVYHD 247
           CL ++Y   G + W F+       V V G  S + A+ L +A + G G+A +P       
Sbjct: 183 CLTHSY--VGKSLWHFEQDGEQVSVPVQGNISANEASTLLQATIAGAGVAMLPSYQAGAH 240

Query: 248 FRNGELVDVFPEQVGKKLGIYAVYPFTRQPPNKVRLLIEHIRARY 292
            +NGEL+ + P    +++ +YAVY   +  P+ +R L++ +  ++
Sbjct: 241 IKNGELIRLLPHAAPRRMNMYAVYASRKHMPSALRSLLDFLVQKF 285