Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Transcriptional regulator, LysR family, in formaldehyde detoxification operon from Pseudomonas fluorescens FW300-N2E2

 Score =  171 bits (433), Expect = 2e-47
 Identities = 95/282 (33%), Positives = 154/282 (54%), Gaps = 7/282 (2%)

Query: 9   FYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAGKALLHGA 68
           F  V E   F+  AE+ G+++S +S+++ RLEE L  +LLYR+TR++TLTEAG+  L   
Sbjct: 12  FVAVAECSQFTAAAERLGVSSSHISRQIVRLEERLQTRLLYRSTRRVTLTEAGQTFLQHC 71

Query: 69  KNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLTVDMSLDN 128
           + ++   +EAL AV        G ++M+     G+  +   V  F  L+P L VD+ L N
Sbjct: 72  QRLQDGREEALRAVGDLASEPKGMLRMTCAVAYGERFIVPLVTRFMGLYPQLRVDIELSN 131

Query: 129 RFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPEDLARHNC 188
           R +DLV    DL IR G L+DS L+A  +   +  +CASP+Y+ R G+P    +L+RHNC
Sbjct: 132 RPLDLVHESLDLAIRLGRLQDSRLVATRLAPRRMYLCASPSYLERYGRPHSLSELSRHNC 191

Query: 189 LQYAYQTTGATD-WEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPRCLVYHD 247
           L       G++D W+ +     +  +V G +  ++  A+  AAL G G+  +P   V   
Sbjct: 192 L------IGSSDIWQLEQNGREFSQRVQGNWRCNSGQAVLDAALQGVGLCQLPDYYVLEH 245

Query: 248 FRNGELVDVFPEQVGKKLGIYAVYPFTRQPPNKVRLLIEHIR 289
             +G L+ +          ++A+YP  R    KVR L+++++
Sbjct: 246 LHSGALISLLEAHQPPNTAVWALYPQQRHLSPKVRKLVDYLK 287