Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., Cyn operon transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score =  164 bits (414), Expect = 3e-45
 Identities = 101/288 (35%), Positives = 155/288 (53%), Gaps = 3/288 (1%)

Query: 2   RADDLILFYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAG 61
           R+ ++ +F  V + GS S  A   GLT S VS+ +AR E+ LG +LL RTTR +T T  G
Sbjct: 6   RSGEMSVFATVAQEGSLSAAARALGLTPSAVSRIIARTEQRLGTRLLLRTTRAITFTAEG 65

Query: 62  KALLHGAKNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLT 121
           +A L GA+ +     E  +A+   G    G + +S     G   +   VA F   +P + 
Sbjct: 66  EAFLRGARRILADMDEVEEAIADQGVP-RGRLLVSAALGHGRQAIVPLVAAFSARYPNIV 124

Query: 122 VDMSLDNRFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPE 181
           VD++L +  VD++ G  D+ +R G+L DS L AR I D+  VV ASP Y+ R+G P++PE
Sbjct: 125 VDLTLGDEVVDILGGQADVAVRFGHLPDSPLTARRIGDTGQVVVASPDYLQRHGTPVEPE 184

Query: 182 DLARHNCLQYAYQTTGATDWEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPR 241
           DL RHNCL++ ++     +W F      + +KVSG     +  AL + A  G GIA +  
Sbjct: 185 DLLRHNCLRFNFR-RAEPNWPFIRDGREFSLKVSGNIECSSGEALAQFARVGAGIARIGE 243

Query: 242 CLVYHDFRNGELVDVFPE-QVGKKLGIYAVYPFTRQPPNKVRLLIEHI 288
             V  D + G+L+ +      G +  I+AV+      P +VRL ++ +
Sbjct: 244 FTVSEDLQRGDLIPLLEAWNPGDREPIHAVFVGGSAMPARVRLFVDFL 291