Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N1B4

 Score =  175 bits (444), Expect = 1e-48
 Identities = 98/285 (34%), Positives = 163/285 (57%), Gaps = 1/285 (0%)

Query: 4   DDLILFYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAGKA 63
           DDL  F  +IE GSF+  A+Q G +   +SKR++ LE    V LL RTTR+L+LT AG A
Sbjct: 5   DDLAAFAVLIEAGSFTLAAQQLGCSKGQLSKRISLLETRFSVVLLQRTTRRLSLTAAGAA 64

Query: 64  LLHGAKNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLTVD 123
           LL  A+ +    + A  A+    ++++G ++M+VP   G+     A+ EF   +P + ++
Sbjct: 65  LLPQAQALVIQVERARQALARLKDDMAGPVRMTVPVSLGETFFDGALLEFSRQYPEVQIE 124

Query: 124 MSLDNRFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPEDL 183
           + L+N + DL   G+DL IR+    D  L+AR +L    + CASPAY+ R G+PL P+ L
Sbjct: 125 LELNNNYRDLSRDGFDLAIRSEVANDERLVARPLLAWHEMTCASPAYLERFGEPLTPQAL 184

Query: 184 ARHNCLQYAYQTTGATDWEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPRCL 243
           A H CL  ++  +G  +W +        V+VSG F++++   L+KAAL   GIA +P  L
Sbjct: 185 AEHRCLLNSHY-SGREEWLYHQQHELLRVRVSGPFASNHYNLLKKAALSDAGIARLPSYL 243

Query: 244 VYHDFRNGELVDVFPEQVGKKLGIYAVYPFTRQPPNKVRLLIEHI 288
           +  +  +G L  +  +   + + +Y V+P+    P + ++L +++
Sbjct: 244 LQEELADGRLRWLLRDYQTRSMPMYLVHPYQGGLPKRTQVLADYL 288